| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3168 |
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| Symbol | |
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| ID | 5192280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3584853 |
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| End bp | 3585749 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587614 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001268480 |
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| Protein GI | 148548378 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | [TIGR03339] aminoethylphosphonate catabolism associated LysR family transcriptional regulator |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.655223 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGTTT CCCACGCTCA ACTCAAGGCT TTCCACGCGG TGGCCGTGCA CGGCAGCTTT
ACCCGCGCCG CTGAAAGGCT GTTTCTTACC CAGCCTGCGG TGTCCGATCA GGTGCGCAAA
CTGGAGGAGC GCTTCGGCGT ATTGCTGTTC CACCGCAACA AACGCTCGGT GCAGCTCACC
GACCTTGGTG AGCGGCTGCT GGGCATCAGC CAACGCCTGT TCGCCTGCGA GGCCGAGGCA
CAGGAGCTGC TGCACGACTC GCGTGCGCTG CACACCGGCA GCCTGGTGCT GGCAGTGGAT
GCGCCGGTGC ACGTGCTGCC GCAGATCGCC CGCTTCTGCC AGCGTTATCC GGGTATCCAG
GTGAAGATCG AAACGGGCAA TACCGACGAA TCGCTGGCGC GGCTGTTCAG CTATCAGGCC
GACCTGGCCC TGCTGGGGCG GGATGTCGAC GATGAGCGCC TGCATTGCCT GCCGCTGCGT
CGTGACCCGA TGGTGGCGTT CGTTTCCCAC CACCACCCAT GGGCCAGCCG TGGCTCGATC
AGCCTGGCCG ACCTGGACGA CACGCCACTG GTGCTGCGCG AGCCCGGCTC GGTAACGCGG
CAAACGCTGG AAGAAGAGAT GCAACGTGCC GGCCTGCGGA TACGCGCAGC GATCCAGGTG
GAGGGCCGGG AAGCGGCGCG TGAAGCGGTG GTGGTAGGGA TTGGTGTGGG CGTGGTGTCG
GCGGCGGAGT TCGGTGCCGA TGCGCGGGTG TGTGCGTTGC CGATTGTCGA TTGCCAGCGG
CATTTGACCG AGACCCTGGT GTGCCTGAGC GAGCAGCGTA CACGCCGGGT GGTGGCGACT
TTCCTGCAGA TGGTCGAGGA AGGGGCCAGA TCAGGCAACC CGACTATGCT GGGATAA
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| Protein sequence | MSVSHAQLKA FHAVAVHGSF TRAAERLFLT QPAVSDQVRK LEERFGVLLF HRNKRSVQLT
DLGERLLGIS QRLFACEAEA QELLHDSRAL HTGSLVLAVD APVHVLPQIA RFCQRYPGIQ
VKIETGNTDE SLARLFSYQA DLALLGRDVD DERLHCLPLR RDPMVAFVSH HHPWASRGSI
SLADLDDTPL VLREPGSVTR QTLEEEMQRA GLRIRAAIQV EGREAAREAV VVGIGVGVVS
AAEFGADARV CALPIVDCQR HLTETLVCLS EQRTRRVVAT FLQMVEEGAR SGNPTMLG
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