Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3160 |
Symbol | |
ID | 5192383 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3574012 |
End bp | 3574680 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640587606 |
Product | methyltransferase type 12 |
Protein accession | YP_001268472 |
Protein GI | 148548370 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2264] Ribosomal protein L11 methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.657234 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0993246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACC CTGAAGACGC CTTGCTCGAC AGTTGGCACC ATAACGCCCA AGTCTGGATC GACGCCGTAC GCAGCGGCGC CATCGAAAGC CGTCGCCAGG TCACCGACCA GGCCATCCTG CTGGCCATCC TCGCCCGCCA GCCCGAACGG GTACTTGACC TGGGCTGCGG TGAGGGCTGG CTGCTGCGCG CGCTGGCCAG CCGGGGTATC GAGGCCGTGG GCGTCGACGG CGACAGCTCC CTGGTGGATG CAGCGCAGGC TGCGGGCGCG GGTGAGGTGC ACCTGGCCAG CTATGCGCAG CTGGCTGAGG CGAAGGTGCA TGTTGGCAAG GACTATGACC TGATCTGCGC CAACTTCGCG CTGTTGCACC AGGACATCAT TGAACTGTTG TCGGCCATGC GTACTTTGCT GGTGCCCGGC GGTGCGCTGG TGATCCAGAC CCTGCACCCG TGGAGCGTGG CCGGTGGAAA TTATCAGGAT GGCTGGCGAG AGGAGTCTTT TGCCGGGTTC GCCGGGGATT GGCAACCGAT GCCTTGGTAT TTCCGCACCC TGGCCAGCTG GCTGAATGCG CTGGACATGG CGGGGTTGAG ACTGTTCAGT CTGCAGGAAC CGCAGCACCC GCAGAGCGCG GTGCCGCAGT CGTTGTTGAT GGTGGCTGAG CGTCACTGA
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Protein sequence | MRNPEDALLD SWHHNAQVWI DAVRSGAIES RRQVTDQAIL LAILARQPER VLDLGCGEGW LLRALASRGI EAVGVDGDSS LVDAAQAAGA GEVHLASYAQ LAEAKVHVGK DYDLICANFA LLHQDIIELL SAMRTLLVPG GALVIQTLHP WSVAGGNYQD GWREESFAGF AGDWQPMPWY FRTLASWLNA LDMAGLRLFS LQEPQHPQSA VPQSLLMVAE RH
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