Gene Pput_3160 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3160 
Symbol 
ID5192383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3574012 
End bp3574680 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content65% 
IMG OID640587606 
Productmethyltransferase type 12 
Protein accessionYP_001268472 
Protein GI148548370 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2264] Ribosomal protein L11 methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.657234 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0993246 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAACC CTGAAGACGC CTTGCTCGAC AGTTGGCACC ATAACGCCCA AGTCTGGATC 
GACGCCGTAC GCAGCGGCGC CATCGAAAGC CGTCGCCAGG TCACCGACCA GGCCATCCTG
CTGGCCATCC TCGCCCGCCA GCCCGAACGG GTACTTGACC TGGGCTGCGG TGAGGGCTGG
CTGCTGCGCG CGCTGGCCAG CCGGGGTATC GAGGCCGTGG GCGTCGACGG CGACAGCTCC
CTGGTGGATG CAGCGCAGGC TGCGGGCGCG GGTGAGGTGC ACCTGGCCAG CTATGCGCAG
CTGGCTGAGG CGAAGGTGCA TGTTGGCAAG GACTATGACC TGATCTGCGC CAACTTCGCG
CTGTTGCACC AGGACATCAT TGAACTGTTG TCGGCCATGC GTACTTTGCT GGTGCCCGGC
GGTGCGCTGG TGATCCAGAC CCTGCACCCG TGGAGCGTGG CCGGTGGAAA TTATCAGGAT
GGCTGGCGAG AGGAGTCTTT TGCCGGGTTC GCCGGGGATT GGCAACCGAT GCCTTGGTAT
TTCCGCACCC TGGCCAGCTG GCTGAATGCG CTGGACATGG CGGGGTTGAG ACTGTTCAGT
CTGCAGGAAC CGCAGCACCC GCAGAGCGCG GTGCCGCAGT CGTTGTTGAT GGTGGCTGAG
CGTCACTGA
 
Protein sequence
MRNPEDALLD SWHHNAQVWI DAVRSGAIES RRQVTDQAIL LAILARQPER VLDLGCGEGW 
LLRALASRGI EAVGVDGDSS LVDAAQAAGA GEVHLASYAQ LAEAKVHVGK DYDLICANFA
LLHQDIIELL SAMRTLLVPG GALVIQTLHP WSVAGGNYQD GWREESFAGF AGDWQPMPWY
FRTLASWLNA LDMAGLRLFS LQEPQHPQSA VPQSLLMVAE RH