| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3155 |
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| Symbol | |
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| ID | 5194057 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3567138 |
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| End bp | 3568874 |
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| Gene Length | 1737 bp |
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| Protein Length | 578 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587601 |
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| Product | type I secretion system ATPase |
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| Protein accession | YP_001268467 |
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| Protein GI | 148548365 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4618] ABC-type protease/lipase transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAAGC CACCACGCAC CCGCTCCGAG CTGGCCGACG TGCTGTTTCG CTTGCGCCGC
AGCTTCTACG CCCTGGCCGC CTTCAGCGGC GTGATAAACG TCATGATGTT GACGCCAGCC
ATCTATATGT TGCAGGTGTA CGACCGCGCC CTGGTCAGCC GCAATGTCAC GACCTTGGGC
ATGCTCACCT TGCTGGTGGT CGGGCTGTTC CTGCTGATGT CGGCGCTGGA GATGGTCCGC
ACCCGGGTGT TGATAAGGGT GGGCAACGGC CTGGACATGA GCCTGAACCG GCGCCTCTTC
AGCGCTGCCT TCGAACGCAA CCTGAGCCGT GCCGGCGGTA ACCCGGCCCA GGCCCTGCAG
GACTTGGCGC AGGTACGGCA GTTTCTCACC GGCAACGGCC TGTTCGCGTT CTTCGACGCC
CCCTGGACAC CGATCTACCT GCTGGTTTGC TACCTGATCC ACCCCTGGCT CGGGCTGGTC
ACCACGATTG GCTCGCTGAT CCTCGTCGGG CTGGCCTACC TCACTGAAAA GGCTACGCAA
AAGCCCTTGG CCGAAGCCAA CCAGGCAGCC ATGTCGTCAG CCAGCTACGC CAACAACAAC
CTGCGCAACG CCGAAGTGAT CGAAGCCATG GGCATGCTGC CGTCAATCGG CAAGCGCTGG
TACCAAGGCC ACTTGCGCAT CCTGCAGATG CAGACCCTGG CCTCCGATCG CGCGGCGCTG
ATCAGCAGCA CCGGGCGCTT CGTGCGCATC ACCCTGCAGT CGCTGATCCT CGGCACCGGC
GCGCTGCTGG CGATCGAGGG CACGATCACC CCCGGCATGA TGATCGCCTG CTCAATCCTG
ACCGGCCGAG CCCTGGGCCC GGTGGAACAG GTGATCGCCG CGTGGAAGCA ACTGCTGGGC
TGCCGCCTGG CCTGGGGCAG GCTCAATGAC CTGCTGCAGG ACTACCCGCA ACGGCCACCG
AGCATGTCGC TGCAGCGGCC GATGGGCATG CTGGCCGTGG AGAACGTGAT CGCCGGCGCC
CCTGGCAGCA CCACCAGCAT CGTACGCGGG GTGAGCTTCA GCCTGGCCCC GGGTGACAGC
CTGGGTGTCA TCGGCCCTTC GGCCTCGGGC AAGTCCACCC TCGCCCGCCT GCTGGTAGGT
GTGTGGCCGG CCCAGGCCGG CAAGGTGCGC CTGGACGGCG CCGATATCTT CACCTGGAAC
AAGGCCGAAC TGGGCCCGTG GCTGGGCTAC CTGCCGCAGG ACGTGGAGCT GTTCGAAGGC
ACCATCGCCG AAAACATCGC CCGCTTTGCC GAGGTGGACA GCGACGCGGT GATCCGTGCT
GCCCGCAGCA GCGGTGTACA CGACATGATC CTGCGCTTCC CGCAGGGTTA CGACACCCGC
CTGGCCGCCG ATGGCAGCCC ATTGTCTGGC GGCCAGAAGC AACGCATCGC CCTGGCCCGC
GCCCTGTATG GCGAGCCCAA CCTGGTGGTG CTGGACGAGC CCAACGCCAA CCTCGATGAC
GTGGGTGAAA AAGCCTTGGT CGATGCCCTG GCCGAGCTCA AGGCACGCGG CGCCACGGTG
GTGCTGATTT CCCACCGGCC CAATGTGCTG TGCGCGGTCG ACCAGATACT GATGCTGCGC
GACGGTGGTG TGCACATGCT TGGCAGCCGC GACGAAGTGT TCGCCGCGCT GCGCAAGGCC
GCGGTGATTC CGGCAACGGC TGCGGCACCG CTGGCTTCGG TCAAAGTACG GGAGTAA
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| Protein sequence | MAKPPRTRSE LADVLFRLRR SFYALAAFSG VINVMMLTPA IYMLQVYDRA LVSRNVTTLG
MLTLLVVGLF LLMSALEMVR TRVLIRVGNG LDMSLNRRLF SAAFERNLSR AGGNPAQALQ
DLAQVRQFLT GNGLFAFFDA PWTPIYLLVC YLIHPWLGLV TTIGSLILVG LAYLTEKATQ
KPLAEANQAA MSSASYANNN LRNAEVIEAM GMLPSIGKRW YQGHLRILQM QTLASDRAAL
ISSTGRFVRI TLQSLILGTG ALLAIEGTIT PGMMIACSIL TGRALGPVEQ VIAAWKQLLG
CRLAWGRLND LLQDYPQRPP SMSLQRPMGM LAVENVIAGA PGSTTSIVRG VSFSLAPGDS
LGVIGPSASG KSTLARLLVG VWPAQAGKVR LDGADIFTWN KAELGPWLGY LPQDVELFEG
TIAENIARFA EVDSDAVIRA ARSSGVHDMI LRFPQGYDTR LAADGSPLSG GQKQRIALAR
ALYGEPNLVV LDEPNANLDD VGEKALVDAL AELKARGATV VLISHRPNVL CAVDQILMLR
DGGVHMLGSR DEVFAALRKA AVIPATAAAP LASVKVRE
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