Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3146 |
Symbol | |
ID | 5190723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3540274 |
End bp | 3541953 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640587592 |
Product | general substrate transporter |
Protein accession | YP_001268458 |
Protein GI | 148548356 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2223] Nitrate/nitrite transporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGTTC TCGACAGCGC ATCCACGGGC AGCAGCGCGC CCCAACGCGG CATCACCAAG GAGGAGCGCA AGGTCATCTT CGCCTCATCC CTGGGCACGG TGTTCGAATG GTACGACTTC TACCTGTACG GCTCACTCGC CGCGATTATC GCCAGGCACT TCTTCGCTGG CGTCAATGAA ACCACCTCGT TCATCTTTGC CTTGCTGGCC TTTGCCGCCG GCTTTGCCGT CCGACCGTTC GGCGCCATCG TGTTCGGTCG CCTGGGCGAC ATGATCGGGC GCAAGTACAC CTTTCTCATC ACCATTGTCA TCATGGGCTT GTCCACCGCA GTGGTGGGGC TGCTACCGGG CTACGCCACG ATTGGCGTGG CCGCGCCGAT CATCCTGATC ACCCTGCGCT TGCTGCAGGG GCTGGCGCTG GGCGGTGAGT ACGGCGGCGC GGCCACCTAC GTGGCCGAGC ATGCGCCCAA GGGCCGACGC GGCTTTTTCA CCGCCTGGAT CCAGACGACT GCCACCCTGG GGCTGTTCCT GTCGCTGCTG GTGATCATGG CCTGTCGCAC GGCCATGGGG ACGGAAGCGT TCGAGGCCTG GGGCTGGCGG ATACCGTTCC TGCTGTCGAT TCTGCTGCTG GCGATTTCGG TGTACATCCG TCTGCAGTTG AACGAGTCGC CGGTATTCAT GAAGATGAAG GCCGAGGGCA AGGCATCCAA GGCGCCCCTG ACCGAATCGT TCGCCCGCTG GGACAACCTC AAGGTGGTGA TCATGTCGCT GCTCGGCGGC ACCGCCGGCC AGGCCGTGGT GTGGTACACC GGGCAGTTCT ACGCGTTGTT CTTCCTGTTG CAGACGCTCA AGATCGAGCC GCAGACCGCC AACCTGCTGA TTGCCGGTTC ACTGTTGATC GGCACACCAT TCTTCATTTT CTTTGGCAGC CTGTCCGACC GGATTGGCCG CAAGAAGATC ATCATGGCCG GCTGCATCAT CGCTGCACTG ACCTACTTCC CGATCTTCAA GGCGCTGACC GAGTACGGCA ACCCGGATGT ATTCGTTGCC CAGGAGCAGA ACCCGGTGGT GGTGGTGGCC GACCCGGGCC AATGTGCATT CCAGTTCGAC CCGGTGGGCA AGGCCAAATT CACCAGCTCT TGCGACATTG CCAAGAGCCT GCTGGCCAAG CGCGCCATCC CGTATACCAA TGAAGCGGCG GAGCCCGGCA GCGTGGCACA GATCCGCATT GGCGAACGGG TATTGCCGAG CTTTGATGGC AGCAGCCTGG CGGCGGCGGA CTTCAAGGTG CAAAGCGAAG CGTTTACCGC AACCCTGAGT GGTGCTTTGA AAGAGGCGGG CTACCCGGAA AAGGCCGATC CGGCGAAGAT CCACTACCCG ATGGTGCTGT TGCTGCTGAC CATTCTGGTG ATCTACGTAA CCATGGTCTA CGGGCCGATT GCCGCCTGGC TGGTGGAGCT GTTCCCGGCG CGCATCCGCT ACACCTCGAT GTCGCTGCCT TACCACATCG GGAATGGCTG GTTCGGCGGC TTCCTGCCGA CCGTGGCGTT TGCCATGGTG GCAGCGACCG GGGATATCTA TTACGGCTTG TGGTACCCGA TCGTGATCGC CGTGATGACG GCGGTGTTGG GGATCTTCTT CCTGCCGGAG ACCAAGGATC GGGATATCAC TCACACCTGA
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Protein sequence | MAVLDSASTG SSAPQRGITK EERKVIFASS LGTVFEWYDF YLYGSLAAII ARHFFAGVNE TTSFIFALLA FAAGFAVRPF GAIVFGRLGD MIGRKYTFLI TIVIMGLSTA VVGLLPGYAT IGVAAPIILI TLRLLQGLAL GGEYGGAATY VAEHAPKGRR GFFTAWIQTT ATLGLFLSLL VIMACRTAMG TEAFEAWGWR IPFLLSILLL AISVYIRLQL NESPVFMKMK AEGKASKAPL TESFARWDNL KVVIMSLLGG TAGQAVVWYT GQFYALFFLL QTLKIEPQTA NLLIAGSLLI GTPFFIFFGS LSDRIGRKKI IMAGCIIAAL TYFPIFKALT EYGNPDVFVA QEQNPVVVVA DPGQCAFQFD PVGKAKFTSS CDIAKSLLAK RAIPYTNEAA EPGSVAQIRI GERVLPSFDG SSLAAADFKV QSEAFTATLS GALKEAGYPE KADPAKIHYP MVLLLLTILV IYVTMVYGPI AAWLVELFPA RIRYTSMSLP YHIGNGWFGG FLPTVAFAMV AATGDIYYGL WYPIVIAVMT AVLGIFFLPE TKDRDITHT
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