| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3143 |
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| Symbol | |
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| ID | 5192580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3537917 |
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| End bp | 3538870 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587589 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001268455 |
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| Protein GI | 148548353 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGGCATG ATCCCAGCCT GCCCAGACCC GCGTCAGAGA GGTACCCTGT GGCTGCCTAT
ACCTTGCGAC AACTGAAGTA CTTCGTCACC ACCGTGGAAG CGGGCAGTGT GGCCGAAGCG
TCACGCCAGC TGTACATCGC CCAGCCGTCC ATCTCCACGG CCATCAAGAG CCTGGAGGAA
AGTTTCGGTG TGCAACTGTT CATCCGCCAC CACGCCCAGG GCGTGTCATT GACGCCCAGC
GGCAAACGCT TCTACGCCAA GACCAAGTCG CTGCTGCAGA TGGCCCATGA GTTCGAACAG
AATGCCCTGG CCGACAACGA TACCGTCGCC GGGCAAATCG ACATTGGCTG TTTCGAAACC
GTGGCGCCAC TCTACCTGCC GCGCCTGATC GCCGGTTTTC GTCAGCGCTA CCCGGGTGTG
GACATTCGCC TGCGCGACGG TGAACAGCAG GACCTGATCC AGGGCCTGAC CGCTGGAACA
TTCGACCTGG CATTTCTCTA TGACCACGAC CTGGATGGCA CCATCGAGGC CGAGCCACTG
ATGCCGCCGC AGAAGCCCTA TGTGCTGCTA CCCGAGAACC ACCGCTTTGC CGGCCAGGCC
CAGGTCTCGC TGCGCGACCT GTGCCCGGAG CCGATGATCC TGCTGGACGT GGCCCCTAGC
CGCACCTACT TCGTCAGCTT GTTCAACGAG ATGGGCCTGG CACCGAACAT TGTCTTCAGT
TCGCCGTCGA TCGAGATGGT GCGCGGCATG GTCGGTCAGG GTTTCGGTTT TTCGTTGCTG
GTAACCCGTC CGCACTCGGA ATACACCTAT GACGGCCAGC GCCTGGCAAT GCTCGACATT
GCCGAGCCGG TGGCGCTGTC GGGGCTGGCT GCGGCGTGGT TGAAGCGAGT CCAGCTGACC
AAGCCGGCGC AGTTGTTCGT GGAGTTTTGC CGGGAAGAGC TGGCGAAGTT CTGA
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| Protein sequence | MRHDPSLPRP ASERYPVAAY TLRQLKYFVT TVEAGSVAEA SRQLYIAQPS ISTAIKSLEE
SFGVQLFIRH HAQGVSLTPS GKRFYAKTKS LLQMAHEFEQ NALADNDTVA GQIDIGCFET
VAPLYLPRLI AGFRQRYPGV DIRLRDGEQQ DLIQGLTAGT FDLAFLYDHD LDGTIEAEPL
MPPQKPYVLL PENHRFAGQA QVSLRDLCPE PMILLDVAPS RTYFVSLFNE MGLAPNIVFS
SPSIEMVRGM VGQGFGFSLL VTRPHSEYTY DGQRLAMLDI AEPVALSGLA AAWLKRVQLT
KPAQLFVEFC REELAKF
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