| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3140 |
|---|
| Symbol | |
|---|
| ID | 5193501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3536021 |
|---|
| End bp | 3536650 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640587586 |
|---|
| Product | paraquat-inducible protein A |
|---|
| Protein accession | YP_001268452 |
|---|
| Protein GI | 148548350 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2995] Uncharacterized paraquat-inducible protein A |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTCC CAGCCATGGC GCACGACCTT GGCTTGTGTC TGTGCCATGG CTGTGGCCAG
GCATGCGACA CGCGCAGTGG CGCGCACACC TGCAACCGTT GCGGCGCCGT CATTCACCGG
CGCAAGGCCA ATGCCATCAG CCGTGGCTGG GCGTTTCTGC TGGCCGCCCT GATTTTCTAC
ATCCCCGCCA ACCTGCTGCC GGTGATGCAC ACCGAAATGC TCGGCAGTGG TACAGAAAGC
ACCATTGGCG GTGGCGTGCT GGAGTTCTGG GAAGCCGGGG CCTGGGACAT CGCGCTGATC
ATTTTCATTG CCAGCGTGGG TGTGCCCGCC ATCAAGTTCT TTTCCCTTGG CCTGCTGCTG
TTCACTGCCC AGCGTGGTTC TTCCTGGGCC TGCCGGCAGC GTTCGCAGCT GTACCGCTTC
GTCGAGCTGA TCGGCTATTG GTCCATGCTC GATGTGATGG TAGTGGCGTT GGTGGCTGCG
CTGGTGCAAC TGCGCGGGCT GGGCACCATC GAGCCGCGTG TGGGCATTCT GTTTTTTGGC
ATGGTGGTTG TGCTGACCAT GTTCTCTGCG ATGAGCTTTG ATCCACGCTT GATCTGGGAT
AGCCATGCCA ACGAGGGGAG GCCGCATTGA
|
|---|
| Protein sequence | MTVPAMAHDL GLCLCHGCGQ ACDTRSGAHT CNRCGAVIHR RKANAISRGW AFLLAALIFY
IPANLLPVMH TEMLGSGTES TIGGGVLEFW EAGAWDIALI IFIASVGVPA IKFFSLGLLL
FTAQRGSSWA CRQRSQLYRF VELIGYWSML DVMVVALVAA LVQLRGLGTI EPRVGILFFG
MVVVLTMFSA MSFDPRLIWD SHANEGRPH
|
|---|
| |