| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3125 |
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| Symbol | |
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| ID | 5194163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3515900 |
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| End bp | 3517612 |
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| Gene Length | 1713 bp |
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| Protein Length | 570 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640587571 |
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| Product | putative FAD-binding dehydrogenase |
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| Protein accession | YP_001268437 |
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| Protein GI | 148548335 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCCG CTCCTCTCGA AACCGAATGC GATGTACTGG TCATAGGTTC TGGCGCCGCC
GGGCTGGCGG CGGCCGTCAC GGCTGCCTGG CATGGGCAGA AGGTGATCGT GGCGGAGAAA
GAACCGGTGT TTGGCGGTGC CACCGCCTGG TCCGGCGGCT GGGCCTGGGT GCCACGCAAC
CCGCTGGCGC GCAGGGCCGG CATCGAGGAA GACATCGAGC AGCCGCGGAC TTATCTGCGC
CATGAGCTGG GGGCAAACTA CAATGCCGAG CGCGTCGATG CCTTCCTTGA GGCGTGCCCG
CACATGGTGG CGTTTTTCGA GAAGTACACG GCGTTGCAGT TTGCCGACGG CAACGGCATC
CCGGACATGC ATGGCGATAC GCCGGGGGCA GCCCTTGGCG GCCACCAGGT GATCGCCGCG
CCCTACGATG CCCGCGAGGT TGGCGCCCTG CTGCCACGCT TGCGCAAGAC CATGCGCGAA
ACTTCGTTCA TGGGCATGCC GATCATGGCC GGAGCCGACC TTGCCGCCTT CCTCAACATG
ACCCGCTCAC CCAAAGCCCT GCTGCACGTG TGCAAGCGCT TTGGCCGACA CCTGTACCAC
CTGGCCCGCC ATGGTCGGGC CATGCACCTG GTCAACGGTG TGGCACTGGT GGCGCGCCTG
GCTAAATCGG CACAGGACCT GGGTGTGCAC CTGCAAGCGT CGGCGCCGGC CAAACGCCTG
CTGATCGAGG GTGGCCAGGT ACGCGGGGCG TGGGTCGCGA CGCCACAGGG TGAGCAACTG
ATCCGCGCCA AGGCCGTGGT GCTGGCGGCA GGTGGTTTCC CCAATGACAA CGCCCGGCGC
CAGCAACTGT TCCCGCGCGA TGCCAGCGGC CACGACAACC TGGCGCTGCC GCCCAAGGGG
TGTTCTGGCG ATGGCCTGCG CCTGGGCGAA TCCGCCGGCG GTGTGGTTGC CACCGACCTG
AAGTCGCCGG TGGCCTGGGC ACCGGTTTCA CAGGTGCCGT ATCGCGACGG CAGCGTCGGC
CACTTCCCGC ACATTATCGA GCGCGGCAAA CCGGGCGTTA TCGGCGTGCT GGCCAACGGC
AAGCGTTTCG TCAACGAAGC GCATGGCTAT TACGACTATG TGTCGGCCAT GGTCGCTGCA
GTGCCGGAGG GCCAGGAGGT GTGCTCGTGG CTGGTTTGCG ATCATCGCTT CTTGCGCCGC
TATGGCTTGG GGCATGCTCG CCCGGCACCG CTGCCGGTAG GGCCGCATGT GCGCAACGGC
TACCTGAAAC GCGGCGCCAC GCTCGAGCAG CTCGCCCAGG CCTGCGGCAT TGACCCGTCC
GGGCTGCGCG CCACGGTCAC TGACTTCAAT AACCATGCCC GTAACGGCCA GGACCCGGCG
TTTGGCCGTG GTTCCACGCC GTTCAACCGC AAGCAGGGTG ACCCACAGCA CAAGGGCCCT
AACCCTTGCG TGGCGCCCAT CGAGCACGGG CCGTTCTATG CGGTGAAAGT AAAGCCTGGC
TGTTTTGGCA CCTTCGCCGG GTTGCGCACC GACGGCAATG CCCGTGTACT GGATGAGGCC
GGGCAACCGA TTGCAGGCCT GTACGCAGCA GGTACCGACA TGGCCAGCGT GTTTGGTGGC
TGGTACCCGT CGGGTGGCAT CAACCTGGGG CCGGCGCTGA CCTTTGGCTA TGTCGCCGGG
CGGCACATTG CCGGGGTGCA GGGGTATGAG TGA
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| Protein sequence | MPSAPLETEC DVLVIGSGAA GLAAAVTAAW HGQKVIVAEK EPVFGGATAW SGGWAWVPRN
PLARRAGIEE DIEQPRTYLR HELGANYNAE RVDAFLEACP HMVAFFEKYT ALQFADGNGI
PDMHGDTPGA ALGGHQVIAA PYDAREVGAL LPRLRKTMRE TSFMGMPIMA GADLAAFLNM
TRSPKALLHV CKRFGRHLYH LARHGRAMHL VNGVALVARL AKSAQDLGVH LQASAPAKRL
LIEGGQVRGA WVATPQGEQL IRAKAVVLAA GGFPNDNARR QQLFPRDASG HDNLALPPKG
CSGDGLRLGE SAGGVVATDL KSPVAWAPVS QVPYRDGSVG HFPHIIERGK PGVIGVLANG
KRFVNEAHGY YDYVSAMVAA VPEGQEVCSW LVCDHRFLRR YGLGHARPAP LPVGPHVRNG
YLKRGATLEQ LAQACGIDPS GLRATVTDFN NHARNGQDPA FGRGSTPFNR KQGDPQHKGP
NPCVAPIEHG PFYAVKVKPG CFGTFAGLRT DGNARVLDEA GQPIAGLYAA GTDMASVFGG
WYPSGGINLG PALTFGYVAG RHIAGVQGYE
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