| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3120 |
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| Symbol | |
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| ID | 5191553 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3509480 |
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| End bp | 3511168 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587566 |
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| Product | fumarate reductase/succinate dehydrogenase flavoprotein domain-containing protein |
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| Protein accession | YP_001268432 |
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| Protein GI | 148548330 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCCCC TTGAATGTGA CGTACTCGTC ATCGGCTCCG GCGCCTCTGG CCTGGCTGCC
GCCGTAACCG CCTCGCATCA TGGCCTGACA GTGGTCGTCG CGGAAAAAGC CAGCCAGCTG
GGCGGCACCA GTGCCTGGTC GGGGGGCTGG TTGTGGATAC CGCGCAACCC TCTGGCCATC
GCCGAAGGCA TCGTCGAAGC CGACGATGCC CCGGAGCGCT ATTTGTGTGC GCAAACCCAC
ACCCGCGAAC TGGACCCGCG TCAACGCGCC TTCCTGCGCC ATGGTCCGGA AATGGTGGCG
TTCTTCCAGC AACACACTGC CGTGCAGTTC CAGTGCGGCA GCCGTATGCC CGACATGCGT
GAAGGCGATG GCAGTGCACG CGGTGGTCGC TCGCTGTGTG CATTACCTTA CGACGGGCGA
CGGCTAGGGC CTTGGCTGCA CACGTTACGC CCACCGCTGG ACATCGTCAG CCTGGCCGGC
ATGGGCATTG CCGGAGGTGC CGACATGGCT GCCTTCTTCA ACGCCACACG CTCGCCGAAG
GCAGCGCTGC ATGTTGGCAA GCGCCTGTTG CGCCATGGCC GAGACCTGCT GCTGCACCGT
CGCGGCCTGC ATCTGGTCAA TGGCAACGCG CTGGTGGCGC GCCTGCTGCG CAGCGCCCTT
GATCGTGGCG TGACATTGCT GACCGAGAAA GCGGCCAGCC GTCTGTTGTT GTGCGAAGAA
CGGGTCAACG GCGCGCTGTT TGCCGATGGC CAAACGATCT ACGCACGGCG TGGTGTGGTG
CTGGCCTGCG GTGGCTTCCC ACATGATCGC CAGCGTATCT CGCAACTGAT ACCGCACGCG
CCGGACGGTG ACCAGCATTA CTCCGCTGCG CCCAGGGAGA ATAGCGGTGA TGGTTTGCGC
CTGGGCGAAC AGGCGGGTGG GCGGGTGTCT GCGGCAGGCG CCCACGGGGG CGCCTGGGCG
CCGGTATCGC AGGTACCGCG CCGCAATGGC CATTTCGGCC ATTTCCCACA CCTGATCGAC
CGTGCCAAGC CCGGTTTCAT CGCCGTGCGC CGCGATGGTC GGCGCTTCGT CAACGAAGCC
GATTGCTACC ACGACTTCAT GAACGCGCTG TTCGCCGCCA CGCCGCAGAC TGAGCAGCCG
GAGGCCTGGC TGATCTGCGA CCATGCTGCG CAACGGCGCT ATGGCATCGG TTGGGCCAAG
CCCTTTCCCT TCCCTACCCG CTTCTATCAG CGCAGTGGCT ATTTGCACAG TGGCGCTACC
CTGGCGCAAC TGGCGCAGCG CTGCGGGATC GACGCCGAGC AGTTGCAGCG CACGGTGGCG
GACTTCAACC ATCATGCGGC ACAAGGTGAA GACCCTACCT TTCTACGTGG CGCGTCGGCC
TACAACCGGG CCCAAGGCGA CCCGCAGCAG GCACCCAACC CGTCGCTTCG GCCGTTGCTG
AAGGGGCCGT TCCATGCGGT GAAACTGCTG CCAGGCAGCC TTGGCACCTT CGCCGGCCTG
GACACAGACG CCTCAGCCCG CGTACTGGAC CACGCAGGGC AGCCGATACC CGGGTTGTTT
GCAGTGGGTA ACGACATGCA CAGCGTGATG GGTGGGTACT ACCCGAGCGG CGGCATTACC
CTTGGCCCTG GGATGACCTT CGGGTATCTG GCCGGTAGAG CGTTGAGCGG GGGCCGTGCA
CATCATTGA
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| Protein sequence | MPPLECDVLV IGSGASGLAA AVTASHHGLT VVVAEKASQL GGTSAWSGGW LWIPRNPLAI
AEGIVEADDA PERYLCAQTH TRELDPRQRA FLRHGPEMVA FFQQHTAVQF QCGSRMPDMR
EGDGSARGGR SLCALPYDGR RLGPWLHTLR PPLDIVSLAG MGIAGGADMA AFFNATRSPK
AALHVGKRLL RHGRDLLLHR RGLHLVNGNA LVARLLRSAL DRGVTLLTEK AASRLLLCEE
RVNGALFADG QTIYARRGVV LACGGFPHDR QRISQLIPHA PDGDQHYSAA PRENSGDGLR
LGEQAGGRVS AAGAHGGAWA PVSQVPRRNG HFGHFPHLID RAKPGFIAVR RDGRRFVNEA
DCYHDFMNAL FAATPQTEQP EAWLICDHAA QRRYGIGWAK PFPFPTRFYQ RSGYLHSGAT
LAQLAQRCGI DAEQLQRTVA DFNHHAAQGE DPTFLRGASA YNRAQGDPQQ APNPSLRPLL
KGPFHAVKLL PGSLGTFAGL DTDASARVLD HAGQPIPGLF AVGNDMHSVM GGYYPSGGIT
LGPGMTFGYL AGRALSGGRA HH
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