Gene Pput_3119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3119 
Symbol 
ID5191552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3509118 
End bp3509438 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content63% 
IMG OID640587565 
ProductNIPSNAP family protein 
Protein accessionYP_001268431 
Protein GI148548329 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACTACG AACTGAGAAC CTACACCCTC GACCCATTGA AAATGGCCGA CTGGCTGGCC 
CTGTACCAAA GCCACGCACT CGAGGTGCAG AGCGAACACC TGGGCAACCT GGTGGGCTTT
TTCACCAGCG AGTTCGGCGA CGTCAACCAA GTGGTGCACA TCTGGGGCTA TGCCAGCCTC
GACGACCGCA TGGCGCGCCG CGCAGCCATG GCGGCAGACT CGCGCTGGGC GGAATTCTCG
CGACGCAACC GAGAGCTGGG CGCGGTACTG CGCCTGCAAT CGCGGCTGCT GCGCCCGACC
GGTTTCTCAC CACTGCAGTA A
 
Protein sequence
MYYELRTYTL DPLKMADWLA LYQSHALEVQ SEHLGNLVGF FTSEFGDVNQ VVHIWGYASL 
DDRMARRAAM AADSRWAEFS RRNRELGAVL RLQSRLLRPT GFSPLQ