| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3116 |
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| Symbol | |
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| ID | 5193913 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3505659 |
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| End bp | 3506429 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587562 |
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| Product | beta-ketoadipate pathway transcription regulator |
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| Protein accession | YP_001268428 |
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| Protein GI | 148548326 |
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| COG category | [K] Transcription |
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| COG ID | [COG1414] Transcriptional regulator |
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| TIGRFAM ID | [TIGR02431] beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACAC CCGCCATCCA TCCCCGTGAC TTGATCGCGG GCTTGCAGAA AGGCCTGGCG
CTGATGCAAC TGTTCAGCGC CGAGCAGCCG CGCCTGAGTG TGCCGCAGGC GGCCAGGTTA
TCTGGCCTTA CGCCCAGTGC GGTGCGGCGG TTTCTGCTGA CCTTGGTGCA CGAGGGCTTT
GCCGAAACTG ACAGCCGGGA GTACTGGCTG ACCCCCAAGG CCTTGCGCAT CGGCCAGGCC
TATGTGGACT CGGCGCAACT GCCGCGCATG CTGCGGCCGA TTGTTGAACA GGTGGCGCGG
CAGACCCAGG AGCACGTATC GGTGGGTACC CGCGATGGCG ATGAGATCAT TCATCTGGTG
CGTAGCCGGT ATAGCCATGT GGCGTCTTTG TCGATCAGGC CGGGCTCGCG GGTACCCATG
TATTGCACGG CCGGCGGGCG TGTCTGGCTG GCCTGGCTGG ATGAGGGGGA ACGGGACGAA
TACTTTGCCC GTCAGCCGCT GCGGGCGTTG ACGCCTTACA CACTGACAGA CCGGGCGCAG
CTGGACGCTG AGCTGTTACG CGTGAAGGGG CAGGGGTTCT GTATCGTTGA TCAGGAATAT
GAAATCGGTA TGCGGGTGCT GGGGGTGCCA TTGCTGGGAC GGGCCGGTCA GTTGAAAGCG
ACGCTGACCA TCACGACTCA TGCTTCGCGG TTGAGTATTG ATGAGATACG GTTGCGGTAT
TTACCGACCC TGTATGAGGC ACAGGCGTTG CTTCGGCCAG TGCTGGATTG A
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| Protein sequence | MNTPAIHPRD LIAGLQKGLA LMQLFSAEQP RLSVPQAARL SGLTPSAVRR FLLTLVHEGF
AETDSREYWL TPKALRIGQA YVDSAQLPRM LRPIVEQVAR QTQEHVSVGT RDGDEIIHLV
RSRYSHVASL SIRPGSRVPM YCTAGGRVWL AWLDEGERDE YFARQPLRAL TPYTLTDRAQ
LDAELLRVKG QGFCIVDQEY EIGMRVLGVP LLGRAGQLKA TLTITTHASR LSIDEIRLRY
LPTLYEAQAL LRPVLD
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