| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3109 |
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| Symbol | |
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| ID | 5192726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3496653 |
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| End bp | 3498785 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587555 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001268421 |
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| Protein GI | 148548319 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor
[TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAAAAA GGTCTGTTGC CCCAGCATCC ATTTCCATGC TGGGCCTGCT CGTTGTGCCT
GCTGTCCACG CTGCCGCCCA AACCGATACG CAAAGTAGCC TCGCCCTGCC GGCCACCGCC
GTCAGCAGCG TCTATGAGCA GCAAAGCTAC AAGGCCAGTG AAAGCCGCAG CGCCATGAAG
ATCGACGCGC CGCTGCGCGA TATCCCGCAA ACCGTCAACG TCGTTCCCGA AAGCGTGATC
AAGGACCAAG GCGCACAGTC CATGGAAGAC GTGCTGAAGA ACGTGCCCGG CATCGGCCTG
TCCAACGGCG ACGGCCAACG CGATCAGGTG ACCATCCGTG GCTTCAGCGC CATTGGCGAC
ATGTACATAG ACGGCGTGCG TGACGACGCC CTGTACTTTC GCGACCTGTC CAACATCGAG
CGTGTCGAGG TGATCAAGGG CCCGGCCGCG GTGCTGTATG GCCGTGGCTC CTCGGGCGGG
CTGATCAACA GCATCAGCAA AAAACCAAGC TTCACACCCA AGCGTGAAGT CGGCATGAAC
GTCGACAGCG AAGGCAAACG CCGAACCCAG TTCGACACCG GCTGGGCCGA CCCGCAAAGC
AACCAGGCCT ATCGCGTGAC CGGTGCCTTC GAAGACAGCG ACACCTTCCG CGATGATGGC
TACATCGACC GCAAGGCCAT CGCGCCGTCG GCCTACTTCC GTCTCTCGGA CGACCTGGAA
CTGAACCTGG GCGCCACCTA CCTGTACGAC AAGCGCCTGA TCGACTTCGG CATCCCGGCC
CTGGGCAACC GCCCGGTGGA CGTGGACCGC GACAAGCGCT TTGGCTCTGG CGATGCGGAC
CAGGATTACG CCCGCAGCGA GGTGTTCTCG CTTACAGCCA GCCTGGACTA CCGCATCAAC
GACAACTTCA CCCTGACCAA CACCAGCCGT TACTACCGCT ACGACCTGGA CCGCAACAAC
ACCTTGGCCG ACAGCAGCCC GACGCGCTTC GTCACCGCGC CCGACGGTGA ACTGCTGATC
AAGCTCAACC GTGGCAACGT CGCCCGCGAT GAGTACGGCG TGTTCAACCA GACGGAGCTC
AAGCAACAAG CGCAACTGGC CGGCATGCAG CACAACCTGT TGTACGGCGT GGAAGCAGGC
TTTCAGGACA AGTACCAGCG CGTGCTGAGC CAGACCAACG TGGCCCAGGT GCCGGTGTAC
CGTGATGCCT TGGTGCCGGT ACCGGAACAC GCCGCCAACC TGTCTTCCAA GGGCACCAAC
TTCCAGCAGA CCACCGGTCT GTACGTGCAG GACATGATCG AGCTGAACGC GCACTGGAAG
GCACTGGTCG GTGTGCGTTA TGACATCTTT GGCCAGGAGT ACGACGACGA CCGCGTGCAA
AACATCGACC TGGATCGTAC CGACAAGACC TGGAGCCCGC GTGCGGGTCT GGTCTACCAG
CCAGACGCCA TCCAGTCCTA CTACGTGTCG GTCAGCCGCA GCTATCAGCC TTCGGGCGAA
GTGTTCGCGG TGAGCCCGAG CAACCAGCAC CTGGAGCCGG AAGAAACCAC CAACTATGAA
ATCGGCGCCA AATGGGACCT GCTCGACAGC CGCCTGTCAC TGACCGCCGC AGTGTTCCGC
CTTGAGCGCA CCAACATGAA GACTGCCGAC CCGGCCAACC CCAACCTGAC CGTATTGGCT
GGCGAACAGC GTACCGATGG CTTTGAAGCC ACCGTCAGCG GGCATCTCAC CGACAAGTGG
CAAATCTATG CCGGATACGC TTACCTGGAC GCCGAAATCA CCAAGTCCAA CAGCAAGACC
AATGGCGTGG CGAACGAAGG CCAGACCCCT ACCCTGACGC CGCGCAACAG CGCCAACGTC
TGGCTGGTAC GTACCCTGAC ACCAGAGTGG CGTGTGGCCG CCGGAGCCAA CTACGTCGAC
GAACGCTACA CAGCGCTCGA CAATGTGGTG GTGATGCCAG GCTATACCAC CTTCGACGCC
GCGCTGCTGT ACAGCGTGCC GCAGTGGGAT GCCGCGCTGC GCCTGAAGAA CGTGTTTGAC
CGTGACTACT ATGCCTCGGC ACATGGCTCG GTCGACCTGA TCACCCCAGG GGCACCGCGC
ACGCTGGAAG CCAGCTTCAA CTACCGCTTC TGA
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| Protein sequence | MAKRSVAPAS ISMLGLLVVP AVHAAAQTDT QSSLALPATA VSSVYEQQSY KASESRSAMK
IDAPLRDIPQ TVNVVPESVI KDQGAQSMED VLKNVPGIGL SNGDGQRDQV TIRGFSAIGD
MYIDGVRDDA LYFRDLSNIE RVEVIKGPAA VLYGRGSSGG LINSISKKPS FTPKREVGMN
VDSEGKRRTQ FDTGWADPQS NQAYRVTGAF EDSDTFRDDG YIDRKAIAPS AYFRLSDDLE
LNLGATYLYD KRLIDFGIPA LGNRPVDVDR DKRFGSGDAD QDYARSEVFS LTASLDYRIN
DNFTLTNTSR YYRYDLDRNN TLADSSPTRF VTAPDGELLI KLNRGNVARD EYGVFNQTEL
KQQAQLAGMQ HNLLYGVEAG FQDKYQRVLS QTNVAQVPVY RDALVPVPEH AANLSSKGTN
FQQTTGLYVQ DMIELNAHWK ALVGVRYDIF GQEYDDDRVQ NIDLDRTDKT WSPRAGLVYQ
PDAIQSYYVS VSRSYQPSGE VFAVSPSNQH LEPEETTNYE IGAKWDLLDS RLSLTAAVFR
LERTNMKTAD PANPNLTVLA GEQRTDGFEA TVSGHLTDKW QIYAGYAYLD AEITKSNSKT
NGVANEGQTP TLTPRNSANV WLVRTLTPEW RVAAGANYVD ERYTALDNVV VMPGYTTFDA
ALLYSVPQWD AALRLKNVFD RDYYASAHGS VDLITPGAPR TLEASFNYRF
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