| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3100 |
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| Symbol | |
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| ID | 5190573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3487848 |
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| End bp | 3489401 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587546 |
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| Product | galactarate dehydratase |
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| Protein accession | YP_001268412 |
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| Protein GI | 148548310 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2721] Altronate dehydratase |
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| TIGRFAM ID | [TIGR03248] galactarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGTTGA TCGAACATTC CGACTCGCCC CGCTACGTCC GCCTGCACGA CGACGACAAC
GTCGTGGTCG TTGTCAACGA CGGCGGCTTG GGCGAAGGCG CCCGCTTCGC CGACGGCCTG
ACCCTGATCG AAGGCGTGCC GCAAAGCCAC AAGGTGGCCA CCGTGGCCAT CGCCAAGGGC
GAGCCCGTGC GCCGCTACGG GCAAATCATC GGCTACGCGC TGGAGGACCT GCGCCAAGGC
AGCTGGGTTC AGGAAAGCCA GCTGGCCATG CCGGCCGCCC CGGACCTGGA CAGCCTGCCG
CGCTGCGATG CAGTGCCACA ACCGCTGCCG CCGCTGGAGG GCTTCACTTT CGAGGGCTAT
CGCAACGCCG ACGGCACTGT CGGCACCCGC AATATCCTCG GCATCACCAC CACCGTGCAG
TGCGTGACCG GCGTGCTGGA ACATGCAGTC AAGCGCATTC GCAACGAACT ACTGCCCAAA
TACCCCAACG TCGATGACGT GGTAGCCATT ACCCACAGCT ACGGCTGCGG TGTGGCAATC
AACGCCCGCG ACGCTTACAT CCCGATCCGC ACCGTGCGCA ACCTGGCGCG CAACCCCAAC
CTGGGCGGCG AGGCACTGGT GATCAGCCTG GGCTGTGAAA AACTGCAAGC CAGCCAGGTG
ATGCACGACA ACGACCCCTC GGTGGACCTC AGCGACCCAT GGCTGTACCG CCTGCAAGAT
GCCAGCCTTG GCTTTGTTGA AATGATCGAG CAGATCATGG ACCTGGCCGA AACCCGCCTG
AAGAAGCTCG ACCAACGCCG CCGCGAAACG GTCCCGGCCA GCGAACTGAT CCTCGGTATG
CAATGCGGTG GCAGCGACGC CTTCTCGGGC ATCACCGCCA ACCCGGCACT GGGCTATGCC
GCCGACCTGC TGGTCCGCGC TGGCGCCACC GTGCTGTTCT CTGAAGTGAC CGAGGTGCGC
GACGCGATCT ACATGCTGAC CTCGCGCGCG GAAAACCAGG ACGTTGCCGA CGCGCTGGTG
CGCGAAATGG ACTGGTACGA CCGCTACCTG CAGCAAGGCG CCGCCGACCG CAGCGCCAAC
ACCACACCGG GCAACAAGAA AGGCGGGCTG TCGAACATCG TCGAGAAATC GCTGGGTTCG
ATCGTCAAGT CGGGCAGCGG CGCTATCCAG GGTGTGCTCG GCCCAGGCGA ACGGGTCAAC
CGCAAAGGCC TGATTTTCTG CGCCACCCCA GCCAGCGACT TTGTCTGCGG CACCTTGCAG
CTGGCAGCCG GCATGAACCT GCACGTCTTT ACTACCGGCC GCGGCACCCC GTATGGCCTG
GCCATGGCAC CGGTGGTCAA AGTGTGCACC CGCAGCGAAC TGGCCCAGCG CTGGCCCGAC
CTGATCGACA TCGACGCCGG TCGCATCGCC AGTGGTCGCT CGACCATCGA GGAGCTGGGT
TGGGAGCTGT TCCATTACTA CCTGGACGTG GCCAGCGGCC GCAAGCAGAC CTGGGCCGAA
CAACACCGGT TGCACAACGA CATCACCCTG TTCAACCCGG CGCCCATTAC CTGA
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| Protein sequence | MQLIEHSDSP RYVRLHDDDN VVVVVNDGGL GEGARFADGL TLIEGVPQSH KVATVAIAKG
EPVRRYGQII GYALEDLRQG SWVQESQLAM PAAPDLDSLP RCDAVPQPLP PLEGFTFEGY
RNADGTVGTR NILGITTTVQ CVTGVLEHAV KRIRNELLPK YPNVDDVVAI THSYGCGVAI
NARDAYIPIR TVRNLARNPN LGGEALVISL GCEKLQASQV MHDNDPSVDL SDPWLYRLQD
ASLGFVEMIE QIMDLAETRL KKLDQRRRET VPASELILGM QCGGSDAFSG ITANPALGYA
ADLLVRAGAT VLFSEVTEVR DAIYMLTSRA ENQDVADALV REMDWYDRYL QQGAADRSAN
TTPGNKKGGL SNIVEKSLGS IVKSGSGAIQ GVLGPGERVN RKGLIFCATP ASDFVCGTLQ
LAAGMNLHVF TTGRGTPYGL AMAPVVKVCT RSELAQRWPD LIDIDAGRIA SGRSTIEELG
WELFHYYLDV ASGRKQTWAE QHRLHNDITL FNPAPIT
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