| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3099 |
|---|
| Symbol | |
|---|
| ID | 5190572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3486406 |
|---|
| End bp | 3487770 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 640587545 |
|---|
| Product | d-galactonate transporter |
|---|
| Protein accession | YP_001268411 |
|---|
| Protein GI | 148548309 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | [TIGR00893] d-galactonate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCGA CTAAGAAAAC GCATGTGCGC TACCTGATCC TGTTCATGCT GTTTCTGGTG
ACCACGATCA ACTATGCCGA CCGCGCTACC ATTGCTATCG CAGGCTCCAG CCTGCAGAAA
GACCTCGGCA TTGACGCCGT AACCCTCGGT TATATCTTTT CCGCCTTTGG ATGGGCTTAC
GTGGCTGGCC AGATTCCTGG TGGCTGGCTG CTCGATCGCT TCGGTTCCAA GAACGTCTAC
GCCTTCAGCA TCTTCACCTG GTCGCTGTTC ACCCTGCTGC AGGGTTTTGT CGGTGGCCTG
CCGGTTGCCT GGGCCGTGGT CACCCTCTTC ACCTTGCGCT TCCTGGTCGG TTTCGCCGAA
GCCCCGTCAT TCCCGGGTAA CGCGCGCATC GTCGCCGCAT GGTTCCCGAC CCAGGAACGC
GGCACGGCGT CGGCCATCTT CAACTCGGCG CAGTATTTCG CCACTGCACT GTTCGCCCCG
ATCATGGGCT GGATCGTGTT CAGCTTCGGC TGGGAGCACG TCTTCGTGGT CATGGGTGTG
CTGGGCATCA TCTTCTCGAT GGTGTGGCTG AAGACCATCT ACAATCCGCG CCAACACCCG
CGCATCAGCC AAAGCGAACT CGAGCACATC GAGCAGAACG GCGGCCTGGT CGACATGGAC
CAGAAGCGCG GCAGCGACGG CCCGAAATGG GGTTACATCA AGCAGTTGCT GACCAGCCGC
ATGCTGCTGG GCGTATACCT GGGCCAGTAC TGCATCAACG CCATCACCTA CTTCTTCCTC
ACCTGGTTCC CGGTGTACCT GGTGCAGGAA CGTGGCATGA CCATTCTCAA GGCCGGCTTC
ATCGCCTCGC TGCCGGCGGT GTGTGGTTTT ATCGGCGGCG TCCTGGGTGG CGTGATCTCC
GACTGGCTGC TGCGCCGCGG CAACTCGCTG ACCTTTTCGC GCAAACTGCC GATTGTCTGT
GGCCTGCTGC TGTCCACCAC CATGGTGTTC TGCAACTACG TCGATGCCGA GTGGATGGTG
GTTGGCTTCA TGACGCTGGC GTTTTTCGGC AAGGGCATCG GCGCGCTGGG CTGGGCGGTG
GTGGCGGACA CTTCACCCAA GCAGATCGCC GGGCTGTCCG GTGGCCTGTT CAACACCTTC
GGCAACATCG CGTCGATCAC CACCCCTATC GTGATCGGCT ACATCATCAG CGCCACCGGC
TCGTTCAAGT GGGCGCTCGT GTACGTGGGT GCCAACGCGC TGGTAGCGGT ATTCAGCTAT
CTGGTTATCG TCGGCCCCAT CAAGCGTATC GAATTGCGTG ATGCTGCCCC GAAGCCACAC
GCTGAGCCTG CCACCGACGG CGAACTGGCC AGCTCCCGTC ACTGA
|
|---|
| Protein sequence | MQATKKTHVR YLILFMLFLV TTINYADRAT IAIAGSSLQK DLGIDAVTLG YIFSAFGWAY
VAGQIPGGWL LDRFGSKNVY AFSIFTWSLF TLLQGFVGGL PVAWAVVTLF TLRFLVGFAE
APSFPGNARI VAAWFPTQER GTASAIFNSA QYFATALFAP IMGWIVFSFG WEHVFVVMGV
LGIIFSMVWL KTIYNPRQHP RISQSELEHI EQNGGLVDMD QKRGSDGPKW GYIKQLLTSR
MLLGVYLGQY CINAITYFFL TWFPVYLVQE RGMTILKAGF IASLPAVCGF IGGVLGGVIS
DWLLRRGNSL TFSRKLPIVC GLLLSTTMVF CNYVDAEWMV VGFMTLAFFG KGIGALGWAV
VADTSPKQIA GLSGGLFNTF GNIASITTPI VIGYIISATG SFKWALVYVG ANALVAVFSY
LVIVGPIKRI ELRDAAPKPH AEPATDGELA SSRH
|
|---|
| |