Gene Pput_3097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3097 
Symbol 
ID5191162 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3484205 
End bp3485014 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content61% 
IMG OID640587543 
Productpeptidase C26 
Protein accessionYP_001268409 
Protein GI148548307 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.925767 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAACA GCAACATTGG CAACAAGCAA CCTTCCCTGC GCAAACCCGT CGTCCTGATG 
ACCATGGGCA GCCAAGAGCG CAAAGGCCAT GACTACCAGG TCATGACCCA CAAATACATT
ACCCCGCTGG TCGAGTTCTC CGACTGCGTC CCGGTGTTGG TGCCTACCTG CTGCGGCACT
GACGACCTCG AGACCTACCT GGACATGGCC GACGGCGTTT ACCTGACTGG CGCTGGCAGC
AATATCGACC CGGCCCTGTA TGGCCAGGAA AACCAGACCC CAGGCAAAGG CCAGGACCAG
AACCGCGACC TGTTCGACAT TCCGCTGGTC AAGGCGGCGA TCAAGCGTGG CCTGCCCATT
TTCGGCATCT GCCGCGGGAT GCAGGAAATC AACGTGGCCC TGGGTGGCGA CATTTACCAG
AAGGTGTATG CCGAACCTGG GTTCAATGAC CACCGGGAAA ACCCGGAAGA CCCGGTCGAC
GTGCAGTACG CCCAGGTGCA TGGGGTGAAG ATCCAGCCGG GCAGCTGGCT GCACGACACC
CTGGGTACCG ACGAGATTCG CGTCAACTCG CTGCATGGCC AAGGCCTGCA CAAGCTCGGC
GCCGGTATTG AAGCCATCGC CCGTGCCGAA GATGGCCTGG TCGAAGCGAT TCACGCGCCA
AGCATTTCGC CGTTCCTGTT CGCCGTGCAG TGGCACCCTG AATGGCAGGC GGCGAAGAAC
CCTGATTCGA TAAAGATCTT CCAGGCCTTC GGCGATGCTT GCCGGGCCCA GGTACGCAAG
GCGCAAATCA AGCGCCAGCA CGCGGCCTGA
 
Protein sequence
MSNSNIGNKQ PSLRKPVVLM TMGSQERKGH DYQVMTHKYI TPLVEFSDCV PVLVPTCCGT 
DDLETYLDMA DGVYLTGAGS NIDPALYGQE NQTPGKGQDQ NRDLFDIPLV KAAIKRGLPI
FGICRGMQEI NVALGGDIYQ KVYAEPGFND HRENPEDPVD VQYAQVHGVK IQPGSWLHDT
LGTDEIRVNS LHGQGLHKLG AGIEAIARAE DGLVEAIHAP SISPFLFAVQ WHPEWQAAKN
PDSIKIFQAF GDACRAQVRK AQIKRQHAA