Gene Pput_3096 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3096 
Symbol 
ID5191648 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3482929 
End bp3483720 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content61% 
IMG OID640587542 
ProductABC-2 type transporter 
Protein accessionYP_001268408 
Protein GI148548306 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCTT ACTGGCAATG TTTCAACGGC ATCATGCTGC GCGAATGGCT GCGCTTCGTG 
CTGCAGCGTA CACGCCTGCT CAGCGCGCTG GTGCGCCCGC TGCTGTGGTT GCTGGTGTTC
GCTGCCGGCT TTCGCGCAGC GCTGGGCATT GCCATCATCG AGCCCTACGA CACCTACATC
CCCTACGAGG TGTACATCAT CCCCGGCCTG GCCTGCATGA TTCTGCTGTT CAACGGCATG
CAGGGCTCAT TGTCGATGGT CTACGACCGC GAGATGGGCA GCATGCGCGT GTTGCTGACC
AGCCCGCTGC CACGCCCGTT CCTGCTGGGC AGCAAACTGC TGGCAACTTC ATTGATTTCC
CTGCTGCAAG TCTATGCCTT CCTCGCCATC GCCTGGTTAT ACGGGGTACA ACCACCGGCT
GCAGGCCTGC TGATGGCGCT GCCAGCGTTG CTGCTGGTGG CCTTCATGCT CAGTGCCTTG
GGGCTATTGC TGTCGAACGC CATCCGCCAG CTGGAGAACT TCGCCGGGGT GATGAACTTC
GTGATCTTCC CGCTGTTCTT CCTGTCGTCG GCGCTGTACC CGTTGTGGAA AATGCGCGAG
GCCAGCCAGT GGTTGTACTG GCTGTGTGCT GCGAACCCGT TCACCCATGC CGTAGAGCTG
GTGCGGTTTG CACTTTATGA GCGGTTGAAC CTGCTGGCGC TGGCGGTGTG CCTGGGGTTG
ACCGCACTGT TCACCCTGCT GGCGATCCTC ACCTTCAACC CCCAGCATGC AGCGCTGCGC
AAGCCGCGCT GA
 
Protein sequence
MNAYWQCFNG IMLREWLRFV LQRTRLLSAL VRPLLWLLVF AAGFRAALGI AIIEPYDTYI 
PYEVYIIPGL ACMILLFNGM QGSLSMVYDR EMGSMRVLLT SPLPRPFLLG SKLLATSLIS
LLQVYAFLAI AWLYGVQPPA AGLLMALPAL LLVAFMLSAL GLLLSNAIRQ LENFAGVMNF
VIFPLFFLSS ALYPLWKMRE ASQWLYWLCA ANPFTHAVEL VRFALYERLN LLALAVCLGL
TALFTLLAIL TFNPQHAALR KPR