Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3096 |
Symbol | |
ID | 5191648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3482929 |
End bp | 3483720 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640587542 |
Product | ABC-2 type transporter |
Protein accession | YP_001268408 |
Protein GI | 148548306 |
COG category | [V] Defense mechanisms |
COG ID | [COG0842] ABC-type multidrug transport system, permease component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACGCTT ACTGGCAATG TTTCAACGGC ATCATGCTGC GCGAATGGCT GCGCTTCGTG CTGCAGCGTA CACGCCTGCT CAGCGCGCTG GTGCGCCCGC TGCTGTGGTT GCTGGTGTTC GCTGCCGGCT TTCGCGCAGC GCTGGGCATT GCCATCATCG AGCCCTACGA CACCTACATC CCCTACGAGG TGTACATCAT CCCCGGCCTG GCCTGCATGA TTCTGCTGTT CAACGGCATG CAGGGCTCAT TGTCGATGGT CTACGACCGC GAGATGGGCA GCATGCGCGT GTTGCTGACC AGCCCGCTGC CACGCCCGTT CCTGCTGGGC AGCAAACTGC TGGCAACTTC ATTGATTTCC CTGCTGCAAG TCTATGCCTT CCTCGCCATC GCCTGGTTAT ACGGGGTACA ACCACCGGCT GCAGGCCTGC TGATGGCGCT GCCAGCGTTG CTGCTGGTGG CCTTCATGCT CAGTGCCTTG GGGCTATTGC TGTCGAACGC CATCCGCCAG CTGGAGAACT TCGCCGGGGT GATGAACTTC GTGATCTTCC CGCTGTTCTT CCTGTCGTCG GCGCTGTACC CGTTGTGGAA AATGCGCGAG GCCAGCCAGT GGTTGTACTG GCTGTGTGCT GCGAACCCGT TCACCCATGC CGTAGAGCTG GTGCGGTTTG CACTTTATGA GCGGTTGAAC CTGCTGGCGC TGGCGGTGTG CCTGGGGTTG ACCGCACTGT TCACCCTGCT GGCGATCCTC ACCTTCAACC CCCAGCATGC AGCGCTGCGC AAGCCGCGCT GA
|
Protein sequence | MNAYWQCFNG IMLREWLRFV LQRTRLLSAL VRPLLWLLVF AAGFRAALGI AIIEPYDTYI PYEVYIIPGL ACMILLFNGM QGSLSMVYDR EMGSMRVLLT SPLPRPFLLG SKLLATSLIS LLQVYAFLAI AWLYGVQPPA AGLLMALPAL LLVAFMLSAL GLLLSNAIRQ LENFAGVMNF VIFPLFFLSS ALYPLWKMRE ASQWLYWLCA ANPFTHAVEL VRFALYERLN LLALAVCLGL TALFTLLAIL TFNPQHAALR KPR
|
| |