| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3093 |
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| Symbol | |
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| ID | 5195178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3479982 |
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| End bp | 3481175 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640587539 |
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| Product | ABC-type branched-chain amino acid transport systems periplasmic component-like protein |
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| Protein accession | YP_001268405 |
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| Protein GI | 148548303 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.239597 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCAGC CTGCCCACCT TGCCTTGACC TGCCTGCTGG CCTTGGCCGC AACGCTGGCT
ACGCCTCTGG CGCCCGCCGC TCAGGGCCAG GCCGCAGCCC CGCTGCACAT ACGCATCGGC
TACCTGGGCT ATCGCCCCGC CGCTGGCCCG CTGCTGTCCA ATGTCATCCC CGAACCCGGC
GATGCCGGGC TCCAAGGTGC CGAACTGGCC ATTGTCGACA GCAACAGCAC CGGGCGCTTC
CTGAAGCAGC AATTTCAGCT GACCAGCGCC AATGTCGACA GCCCCGAGGC CCTGCTGCAA
GCCGCCAGGG CCCAGCATGA ACAAGGCCTG CGCCTGTTCG TGGTAAATGC CCCGGCCGCC
AGCCTGCGCG CGCTGTCTAC CGCCCTGCCC GACAGCCTGC TGTTCAACGC CGGCAGCCCC
GACGACAGCC TGCGCAGCAG CCAGTGCCTG GGCAATGTCC TGCACAGCCT GCCGAGCCGG
GCCATGCTGG CCGATGCCTT GGCGCAGTTC CTGGTACTGC GCAAATGGCA ACGGGCATTG
CTGGTGGTCG GCCAGACCCC GGACGACCAG GCTTACGCCG CTGCCCTGCG GCGGTCGGTG
AAGCGCTTTG GCGTGCAACT GGTCGCGGAG AAAACCTGGA CCTTCGATAA CGACCAGCGC
CGCAGCGCCC AGGCCGACAT GCCGCTGTTC ACCCAGACTG CCGAGTACGA CGTGGTACTG
GTGGCCGACG AACGCGGTGA CTTCGGCGAG TACCTGCCCT ACCAGACGTG GTATCCACGA
CCGGTGGCCG GTACCCAGGG CCTGACCCCC ACGGGCTGGC ACAAGACGGT GGAAACCTTC
GGGGCGGCGC AGTTGCAAAA ACGCTTCGAG GCCCAGGCCG GGCGCTGGAT GAATGACCGT
GACTTCGCCG CCTGGATGGC TGTGCGCAGT GTCGCCAGTG CGGCCAGCAA GCTGCGCCTG
GCCGAACCTC GCGCGCTGCA GCAACTGCTG CTCAGCGAGC AGTTGCCGCT GGACGGCTTC
AAGGGGCGCA AGCTCAGTTA CCGCCCGTGG AACGGCGAAC TGCGCCAGCC GATCCCGTTG
GTTCAGCCCC GCGCCCTGGT CAGCACCTCG CCGCAGGAGG GTTTCCTGCA TCCCTTCAAC
GAAATGGACA GCCTGGGCTA TGACAAGCCC GAAGTGACGT GTAGCTACCC CTGA
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| Protein sequence | MRQPAHLALT CLLALAATLA TPLAPAAQGQ AAAPLHIRIG YLGYRPAAGP LLSNVIPEPG
DAGLQGAELA IVDSNSTGRF LKQQFQLTSA NVDSPEALLQ AARAQHEQGL RLFVVNAPAA
SLRALSTALP DSLLFNAGSP DDSLRSSQCL GNVLHSLPSR AMLADALAQF LVLRKWQRAL
LVVGQTPDDQ AYAAALRRSV KRFGVQLVAE KTWTFDNDQR RSAQADMPLF TQTAEYDVVL
VADERGDFGE YLPYQTWYPR PVAGTQGLTP TGWHKTVETF GAAQLQKRFE AQAGRWMNDR
DFAAWMAVRS VASAASKLRL AEPRALQQLL LSEQLPLDGF KGRKLSYRPW NGELRQPIPL
VQPRALVSTS PQEGFLHPFN EMDSLGYDKP EVTCSYP
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