| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3090 |
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| Symbol | |
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| ID | 5192032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3477054 |
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| End bp | 3477713 |
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| Gene Length | 660 bp |
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| Protein Length | 219 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587536 |
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| Product | pentapeptide repeat-containing protein |
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| Protein accession | YP_001268402 |
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| Protein GI | 148548300 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1357] Uncharacterized low-complexity proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.520855 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTACC TGCCCTTTAC CTTGCTGCTG GCGCTATCCC CTGCCTTGGC AGTGAGCGCC
GACGACACTG GCAACGATAC CCCCTTGACC ATCAACGGCT GTGTGATTGC CGAAGCCAGC
CAGTGCCCGG GGGCCAACCT GCGCGGCGCC AACCTGGCCA ACCAGGACCT GCGCAAGATG
AACCTGGCCG GTGCCGACCT GCGCGATGCC GACCTGCGTC ATGCCCAACT GGACCTGGCA
AATCTGGAAA AAGCCCGCCT GCAAGGTGCC AACCTGACCC GCGCCAGCCT GCAACAGAGC
AATCTGCGCC TGGCTGACCT GAGCAACAGC AGGCTGGTGG CCATTCAAGG CTGGGGCTTG
TTCGCCCAGG GTGCACAGTT TGAAAAGGCG GACCTGCGCG CAGCCTACCT GCAGTTCGCC
AGGCTGTCCG GGGCAAAGCT GCAGCAGGCC AACTTGCAGG CGGCGGACCT GGAGATGGCC
TGGTTGAGCA AGGCCGACCT GCAAGCGGCC AACCTGGGCG ATGCCAACCT GCAGGAGGCC
AAGTTTGGCC AGAGCAACCT GGCACACGCC GATTTGCGCG GGGCGCGGCA GCATTACGGG
AATTTTCAGG AGGCCAACAT GGAGGGGTGC AAGGGGTGCC CTGAAACCTG GGACAAATGA
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| Protein sequence | MNYLPFTLLL ALSPALAVSA DDTGNDTPLT INGCVIAEAS QCPGANLRGA NLANQDLRKM
NLAGADLRDA DLRHAQLDLA NLEKARLQGA NLTRASLQQS NLRLADLSNS RLVAIQGWGL
FAQGAQFEKA DLRAAYLQFA RLSGAKLQQA NLQAADLEMA WLSKADLQAA NLGDANLQEA
KFGQSNLAHA DLRGARQHYG NFQEANMEGC KGCPETWDK
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