| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3089 |
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| Symbol | |
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| ID | 5192031 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3475092 |
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| End bp | 3476987 |
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| Gene Length | 1896 bp |
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| Protein Length | 631 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640587535 |
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| Product | Pyrrolo-quinoline quinone |
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| Protein accession | YP_001268401 |
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| Protein GI | 148548299 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4993] Glucose dehydrogenase |
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| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.326291 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATAA GATCGCTACC CGCCCTTTCC CCTCTGGCCC TGAGCGTGCG CGTCCTGCTG
ATAGCCGGTA GCCTGGCCCT GGGCAATGTG GCAACAGCGG CCAGCACACC CGCTGCACCT
GCCGGCAAGA ACGTCACCTG GGAAGACATC GCCAATGACC ACCTGACCAC CCAGGACGTG
CTGCAGTACG GCATGGGCAC CAATGCCCAG CGCTGGAGCC CGCTGGCCCA GGTCAATGAC
AAGAACGTGT TCAAGCTGAC CCCGGCCTGG TCCTACTCCT TCGGCGACGA GAAGCAGCGC
GGCCAGGAAT CCCAGGCCAT CGTCAGCGAT GGCGTGGTCT ACGTCACCGG TTCGTACTCA
CGGGTATTCG CCCTCGATGC CAAGACCGGC AAACGCCTGT GGACCTACAA CCACCGCCTG
CCCGACAACA TTCGTCCCTG CTGCGACGTG GTCAACCGCG GGGCGGCGAT CTACGGCGAC
AAGATCTACT TTGGCACCCT CGATGCGCGT GTCATCGCCC TCGACAAGCG CACCGGCAAA
GTGGTGTGGA ACAAGAAGTT CGGCGACCAC AGCGCCGGCT ACACCATGAC CGGTGCGCCA
GTGCTGATCA AGGACAAGAC CAGCGGCAAG GTGCTGCTGA TCCACGGCAG CTCCGGCGAT
GAATTCGGCG TGGTCGGCCA GCTGTTCGCA CGCGACCCGG ACACCGGTGA AGAAGTGTGG
ATGCGGCCCT TCGTGGAGGG CCACATGGGC CGCCTGAACG GCAAGGACAG CACCCCGACC
GGTGACGTCA AGGCGCCGTC CTGGCCAGAC GACCCTACCA CCGAAACCGG CAAGGTCGAA
GCCTGGAGCC ACGGCGGCGG TGCCCCTTGG CAAAGCGCGA GCTTCGACCC CGAAACCAAC
ACCATCATTG TCGGCGCTGG CAACCCCGGC CCTTGGAATA CCTGGGCGCG CACGTCGAAG
GACGGCAACC CGCATGACTT CGACAGCCTG TACACCTCCG GCCAGGTCGG CGTCGACCCG
AGTACCGGCG AGGTCAAGTG GTTCTACCAG CACACCCCCA ACGATGCCTG GGACTTCTCC
GGCAACAACG AGCTGGTGCT GTTCGACTAC AAGGACAAGA ACGGCAACGT GGTCAAGGCC
ACCGCCCACG CCGACCGCAA CGGCTTCTTC TATGTGGTCG ACCGCAACAA CGGCAAGCTG
CAGAACGCCT TCCCCTTCGT CGACAACATC ACCTGGGCCA GCCATATCGA CCTGAAGACC
GGCCGCCCGG TGGAAAACCC CGGCCAACGC CCGGCCAAGC CGCTGCCGGG TGAAACCAAG
GGCAAGCCGG TGGAAGTCTC GCCACCGTTC CTGGGTGGCA AGAACTGGAA CCCCATGGCC
TACAGCCAGG ACACCGGGCT GTTCTACATC CCCGGCAACC AGTGGAAAGA GGAATACTGG
ACCGAGGAAG TGAACTACAA GAAGGGCTCG GCTTATCTGG GCATGGGCTT CCGTATCAAG
CGCATGTACG ACGACCACGT CGGCACGTTG CGCGCCATGG ACCCGACCAC CGGCAAGCTG
GTCTGGGAAC ACAAGGAACA CCTGCCGTTA TGGGCCGGCG TGTTGGCGAC CAAGGGCAAC
CTGGTATTCA CCGGCACGGG CGACGGTTTC TTCAAGGCCT TCGACGCCAA GACGGGCAAA
GAGCTGTGGA AGTTCCAGAC CGGCAGCGGC ATCGTCTCGC CGCCCATCAC CTGGGAGCAG
GACGGCGAGC AGTACATCGG CGTGACCGTG GGCTACGGCG GTGCAGTACC GCTGTGGGGC
GGCGACATGG CCGAGCTGAC CAAACCGGTG GCTCAGGGTG GTTCGTTCTG GGTGTTCAAG
ATCCCGAGTT GGGACAACAA GACTGCACAG CGTTGA
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| Protein sequence | MTIRSLPALS PLALSVRVLL IAGSLALGNV ATAASTPAAP AGKNVTWEDI ANDHLTTQDV
LQYGMGTNAQ RWSPLAQVND KNVFKLTPAW SYSFGDEKQR GQESQAIVSD GVVYVTGSYS
RVFALDAKTG KRLWTYNHRL PDNIRPCCDV VNRGAAIYGD KIYFGTLDAR VIALDKRTGK
VVWNKKFGDH SAGYTMTGAP VLIKDKTSGK VLLIHGSSGD EFGVVGQLFA RDPDTGEEVW
MRPFVEGHMG RLNGKDSTPT GDVKAPSWPD DPTTETGKVE AWSHGGGAPW QSASFDPETN
TIIVGAGNPG PWNTWARTSK DGNPHDFDSL YTSGQVGVDP STGEVKWFYQ HTPNDAWDFS
GNNELVLFDY KDKNGNVVKA TAHADRNGFF YVVDRNNGKL QNAFPFVDNI TWASHIDLKT
GRPVENPGQR PAKPLPGETK GKPVEVSPPF LGGKNWNPMA YSQDTGLFYI PGNQWKEEYW
TEEVNYKKGS AYLGMGFRIK RMYDDHVGTL RAMDPTTGKL VWEHKEHLPL WAGVLATKGN
LVFTGTGDGF FKAFDAKTGK ELWKFQTGSG IVSPPITWEQ DGEQYIGVTV GYGGAVPLWG
GDMAELTKPV AQGGSFWVFK IPSWDNKTAQ R
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