| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3087 |
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| Symbol | |
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| ID | 5195111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3473495 |
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| End bp | 3474370 |
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| Gene Length | 876 bp |
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| Protein Length | 291 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587533 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001268399 |
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| Protein GI | 148548297 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGT GGGCGGTGCT GTTGAGTGGC CTGCTGCTGT GTTGCGCGGC GGCCCAGGCG
CAGGTGCGCA ACTATGACGC GATCATCGCC GCCGGCGAGC TCAAGGTGGC GGTGTACAAG
GATTTCGCCC CCTACAGTTT TCAGGACCAC GGCCAGCCGC GTGGTGTCGA TGTGGAGCTG
GCGCAGGCCC TGGCCACGGC CTTGGGGGTA CGCCTGCAAC TGATCTGGGC GCCACCCGGA
GAAAAGCTCG ACGATGACCT GCGCGACTAC ATCTGGCGTG GCAGCCCGCT GCGTCATCAG
CAATTGGCCG ACCTGATGAT GCGGGTGCCT TACGATCGCG CCTACGCGCA ACGGCGCAAC
GAGCTGGGGG AGCTGGAAAA CGCCCAGGTG GTGATGTTCG GCCCCTATCA GCAGGAGCGT
TGGCAGGTGG CCTACGATCG CCGTCGCCTG GCCTCGGTGG CCAGTGTCGC GGTATTCCAG
CAGCATCCTA TCGGGGTCGA GGTGGACAGC GTGCCGTCGT TCTACCTGAC ATCGGTGTTC
AACGGCATGC TCAGCGCCAG GACCCACCAT TACCCCAGCG TGCAGCAAGC TTTCGCTGCC
ATGCAGGCCG GCCAGGTGGA CGCAGTGATG GCGATGCGCG GCGAGGTTGA CTGGCAGCTG
CACCAGGCCG CCGACCCGCA ACTGGCCCTG GCAGAAAACG CCTACCCGAA CCTTGGCAAA
CAGGCCTGGG AAATCGGCAT GGCTGTGCAT GAAAGCAACC GGCAGCTGGC CTATGCCGTG
GAGGAGGCCA TGGAAGCGAT GATTCGCGAT GGCCGGCTCA AGGCGATGTA TGCCGCCTAC
GGCCTGCGTT ACGAGGTCCC GGAGATGTAT CAATAG
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| Protein sequence | MRLWAVLLSG LLLCCAAAQA QVRNYDAIIA AGELKVAVYK DFAPYSFQDH GQPRGVDVEL
AQALATALGV RLQLIWAPPG EKLDDDLRDY IWRGSPLRHQ QLADLMMRVP YDRAYAQRRN
ELGELENAQV VMFGPYQQER WQVAYDRRRL ASVASVAVFQ QHPIGVEVDS VPSFYLTSVF
NGMLSARTHH YPSVQQAFAA MQAGQVDAVM AMRGEVDWQL HQAADPQLAL AENAYPNLGK
QAWEIGMAVH ESNRQLAYAV EEAMEAMIRD GRLKAMYAAY GLRYEVPEMY Q
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