Gene Pput_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3080 
Symbol 
ID5191180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3466063 
End bp3467226 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content63% 
IMG OID640587526 
Productiron-containing alcohol dehydrogenase 
Protein accessionYP_001268392 
Protein GI148548290 
COG category[C] Energy production and conversion 
COG ID[COG1454] Alcohol dehydrogenase, class IV 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCAGA GTTTCAGCCC CCTTCGCAAG TTTGTATCGC CTGAAATCAT CTTTGGTGCC 
GGCTGCCGGC ACAATGTGGC CAATTACGCC AAAACCTTCG GTGCGCGCAA GGTACTGGTG
GTCAGCGACC CTGGCGTGAT CGCGGCCGGC TGGGTGGCGG ATGTGGAGGC CAGCCTGCAG
GCCCAGGGTA TCGACTACTG CCTGTACACA GCGGTGTCAC CCAACCCGCG GGTCGAAGAG
GTGATGCTCG GCGCCGAAAT CTATCGGCAG AACCACTGTG ACGTGATCGT CGCCGTCGGT
GGCGGCAGCC CGATGGATTG CGGCAAGGCC ATCGGCATCG TGGTGGCCCA TGGGCGCAGC
ATCCTCGAAT TCGAGGGCGT GGACATGATC CGCGTGCCCA GCCCGCCGCT GATCCTGATT
CCGACCACCG CCGGCACCTC GGCGGACGTG TCGCAGTTCG TGATCATTTC CAACCAGCAG
GAACGCATGA AGTTCTCCAT CGTCAGCAAG GCGGTGGTGC CGGACGTGTC GCTGATCGAC
CCGCAGACCA CCCTGAGCAT GGACCCGTTC CTGTCGGCCT GTACCGGCAT CGATGCGTTG
GTGCATGCCA TCGAGGCCTT CGTGTCGACC GGCCACGGGC CGCTGACCGA CCCCCATGCG
CTGGAAGCCA TGCGCCTGAT CAATGGCAAC CTGGTGGAGA TGATCGCCAA CCCCACCGAT
ATTGCACTGC GTGAAAAGAT CATGCTCGGC AGCATGCAGG CGGGGCTGGC GTTCTCCAAT
GCGATCCTGG GCGCAGTGCA CGCCATGTCG CACAGCCTGG GCGGCTTCCT CGACTTGCCC
CATGGCTTGT GTAACGCGGT GCTGGTGGAG CACGTGGTGG CGTTCAACTA CAGCTCGGCG
CCGGAGCGTT TCAAAGTGAT CGCCGAAGTG TTTGGTATCG ACTGCCGCGG TCTCAATCAC
CGGCAAATCT GCGGGCGGTT GGTGGAGCAC CTGATTGCCC TGAAGCGTGC CATCGGTTTC
CATGAAACCC TGGGCCTGCA CGGGGTGCGC ACGTCCGATA TCCCGTTCCT GTCGCAACAC
GCGATGGACG ACCCGTGCAT CCTCACCAAC CCCCGTGCGT CGAGCCAGCG TGATGTCGAG
GTCGTTTATG GCGAGGCCCT CTGA
 
Protein sequence
MSQSFSPLRK FVSPEIIFGA GCRHNVANYA KTFGARKVLV VSDPGVIAAG WVADVEASLQ 
AQGIDYCLYT AVSPNPRVEE VMLGAEIYRQ NHCDVIVAVG GGSPMDCGKA IGIVVAHGRS
ILEFEGVDMI RVPSPPLILI PTTAGTSADV SQFVIISNQQ ERMKFSIVSK AVVPDVSLID
PQTTLSMDPF LSACTGIDAL VHAIEAFVST GHGPLTDPHA LEAMRLINGN LVEMIANPTD
IALREKIMLG SMQAGLAFSN AILGAVHAMS HSLGGFLDLP HGLCNAVLVE HVVAFNYSSA
PERFKVIAEV FGIDCRGLNH RQICGRLVEH LIALKRAIGF HETLGLHGVR TSDIPFLSQH
AMDDPCILTN PRASSQRDVE VVYGEAL