| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3077 |
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| Symbol | |
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| ID | 5194700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3461777 |
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| End bp | 3463027 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587523 |
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| Product | outer membrane porin |
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| Protein accession | YP_001268389 |
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| Protein GI | 148548287 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0293927 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATATCC TTTGCCCCCC TTGCCGCATG ACGGTGGCTT GCGCTTGCCT GCTGCTTGGC
GCCGGCAGCG CCCAGGCCCA AGGCTTCAGC GAAGACGCCA AGGTCGGCCT GACCCTGCGC
AACTTCTACA TCAACCGCAA TTTCGTCGAC CCGGCCTACC CCCAGGGCAA GGCCGAAGAA
TGGACGCAAA GCTTCATCCT CGACGCCCGC TCCGGCTTTA CCCAGGGCGT GGTCGGCTTT
GGTGTGGATG TGCTGGGGCT GTACTCGGTC AAGCTCGACG GCGGCCGCGG CACTGCCGGT
ACCCAGTTGC TGCCGGTGCA CGACGATGGC CGCCCGGCGG ATGATTTCGG CCGCCTGGGT
GTGGCACTCA AGGCACGCGT TTCAGCCACA GAGCTGAAGG TTGGCGAATG GTCGCCGATG
CTGCCGGTGC TGCGTTCGGA CGACGGTCGC TCGCTGCCCC AGACCTTCCA AGGCGCCCAG
CTCACCTCCC GCGAAATCGA CAACCTGACC CTTTTCGGCG CACGTTTGCG TGGCAACAGC
CCGCGCAACG ACGCCAGCAT GGAGGACCTG TTCATGGCCG GCAGGCCCAC CGCCACCTCG
GACCGCCTGG ACATCCTTGG TGCCGAATAC CTGTTCAACG AAAAGGCCAC CCAACTCGCC
GTCTGGCATT CGGACCTGCA AGACATCTAC CGCCAACAGT ACTACAACCT GATCCACAGC
CAGGCCGTGG GCAACTGGAC CCTGGGGGCC AACCTCGGCT ACTTCGTCGG CAACGACAGC
GGCCGCTCGC TGGCGGGTGC GATGGACAAC CGCACCACCT CGCTGCTGCT CTGCGCACGT
ACCGGCGGCC ATACCTTGTA TCTGGGGCTG CAGCGGGTCA GCGGCGACAC CGGCTGGATG
CGGGTCAATG GCACTGCCGG CACCAGCCTG GCCAACGACA GCTACAACTC CAGCTACGAC
AACGCCCACG AGCGCTCCTG GCAGCTGCGC TACGACCACA ACTTCGCGGT CGACGGCCTG
CCCGGCCTGC AATTCATGAC GCGTTACATC AGCGGCGACA GCGTGCGCGT CGGCAGCGTG
CGCGATGGCA AGGAATGGGG CCGCGAAACC GAGCTGGCCT ACACCCTTCA AAGCGGCACA
TTGCGTGACC TGACCGTGAG ATGGCGCAGT TCAACCTTGC GCCGGGACTT CAGCAGCAAT
GAGTTCGATG AGCACCGGGT GATCGTGAGT TATCCGTTTT CGATCTTGTA A
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| Protein sequence | MNILCPPCRM TVACACLLLG AGSAQAQGFS EDAKVGLTLR NFYINRNFVD PAYPQGKAEE
WTQSFILDAR SGFTQGVVGF GVDVLGLYSV KLDGGRGTAG TQLLPVHDDG RPADDFGRLG
VALKARVSAT ELKVGEWSPM LPVLRSDDGR SLPQTFQGAQ LTSREIDNLT LFGARLRGNS
PRNDASMEDL FMAGRPTATS DRLDILGAEY LFNEKATQLA VWHSDLQDIY RQQYYNLIHS
QAVGNWTLGA NLGYFVGNDS GRSLAGAMDN RTTSLLLCAR TGGHTLYLGL QRVSGDTGWM
RVNGTAGTSL ANDSYNSSYD NAHERSWQLR YDHNFAVDGL PGLQFMTRYI SGDSVRVGSV
RDGKEWGRET ELAYTLQSGT LRDLTVRWRS STLRRDFSSN EFDEHRVIVS YPFSIL
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