| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3074 |
|---|
| Symbol | |
|---|
| ID | 5195369 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | + |
|---|
| Start bp | 3458842 |
|---|
| End bp | 3459762 |
|---|
| Gene Length | 921 bp |
|---|
| Protein Length | 306 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640587520 |
|---|
| Product | pyruvate carboxyltransferase |
|---|
| Protein accession | YP_001268386 |
|---|
| Protein GI | 148548284 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0190421 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGG CCCCGGCGCA AGCGGTAAAG GTGTTTGAAG TCGGCCCGCG TGACGGCCTG
CAGAACGAGC GCCAGCCATT GTCGGTGGCC GCCCGCGTAA GTTTGATCGG CGCGCTGGCG
TCCACCGGCC TGCGGCATAT CGAAGCCGGT GCCTTCGTGT CGCCGCGCTG GGTGCCGCAA
ATGGCCGGCA GCGAGGAAGT GTTGCGCCAG TTGCCCAACG ACGACGGGGT TCGCTACGCA
GGCCTGGTGC CCAACCTGCA AGGCTTCCAG GCCGCGCAAC GGGCCGGATG CCGCGAGGTG
GCGGTGTTCG CCGCCGCCTC CGAGGCGTTC TCGCGCAACA ACATCAATTG CTCCATCGAT
GACAGCTTCG AACGCTTCAT CCCCGTGCTG CAAGCAGCCA GGCAAGCCTC TGTCCGTGTG
CGCGGTTATG TATCCTGCGT ACTCGGCTGC CCATTCAGTG GTGCGGTGAC GCCAGAGGCC
GTGGCCAAGG TCGCACGGCG CCTGCACGAA CTGGGCTGCT ACGAGATCAG CCTGGGCGAC
ACCATCGGTG CCGGCCGGCC GGACGCAACC GCGCAGCTGT TCGAGCACTG CGCGCAGCAC
GTGCCGGTGG CAGCGTTGGC CGGCCATTTC CACGATACCT GGGGCATGGC CATCGCCAAT
GTTCATGCCG CGCTGGCGCA AGGTGTACGC ACCTTCGACA GTTCGGTCGC AGGCCTTGGC
GGCTGCCCCT ACTCGCCTGG CGCCAGCGGC AACGTGGCCA CGGAAGATTT GTTGTACCTG
TTGCACGGCC TGGGCTACAG CACCGGTGTC GACCTGGAGG CCGTGGCACG GGTTGGCGTG
CACATCAGCG CCCAGCTGGG CACCGCCAAC CGCTCCCGCG CCGGCCTCGC CCTGGCGGCA
AGGAGCGTCA GCCAGCACTG A
|
|---|
| Protein sequence | MTMAPAQAVK VFEVGPRDGL QNERQPLSVA ARVSLIGALA STGLRHIEAG AFVSPRWVPQ
MAGSEEVLRQ LPNDDGVRYA GLVPNLQGFQ AAQRAGCREV AVFAAASEAF SRNNINCSID
DSFERFIPVL QAARQASVRV RGYVSCVLGC PFSGAVTPEA VAKVARRLHE LGCYEISLGD
TIGAGRPDAT AQLFEHCAQH VPVAALAGHF HDTWGMAIAN VHAALAQGVR TFDSSVAGLG
GCPYSPGASG NVATEDLLYL LHGLGYSTGV DLEAVARVGV HISAQLGTAN RSRAGLALAA
RSVSQH
|
|---|
| |