| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3069 |
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| Symbol | |
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| ID | 5192499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3452250 |
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| End bp | 3453653 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587515 |
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| Product | gluconate transporter |
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| Protein accession | YP_001268381 |
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| Protein GI | 148548279 |
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| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
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| COG ID | [COG2610] H+/gluconate symporter and related permeases |
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| TIGRFAM ID | [TIGR00791] gluconate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.384324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCAA ACCAACAAGA AGCTCGCACG GAAGCGATCA GCGATAGAGA AAACCACACG
ATGACTCCAA CGTTCTCATT ACTCGTCCTG GGCACCGCGA TACTCCTGAT CGTCGTCATG
ATCAGCAAAC TCAAAGTACA CCCGTTTCTG GCCTTGATGG CCGCAAGCCT GGTGGTCGGT
GTCGGCACCG GCATGGCGCC TACGGCAATC GTGGCGGCAT TCGAGAAAGG CATGGGCAGC
ACGCTGGGCT TTCTTGCCGG CATCATCGGC CTGGGCAGTA TCCTCGGCAA ACTGCTGGAG
GAATCCGGAG GCGCCAGGCG CATCGCCACC ACACTGCTGA ACAGGCTGGG GGAACGCAAT
ACCTCGTGGG CAATGATGCT CGTCGGCTTC ATCGCCGGCA TCCCGGTATT CTTCGAAGTC
GGCTTCGTCC TGCTGATTCC GTTGATCTAC GTGGTTGCAC GGCAAACCCG CATCAGCATG
CTGTACCTCG GCGTGCCGCT GGTCACCTCG CTGATGGTGG TGCACTGCAT TCTCCCGCCA
CACCCGGCCG CCACAGCCAT TACCGGCATG CTCAATGCGG ATATCGGTAC GGTCATCCTG
TACGGCCTGA TCGTTGGCCT GCCGACCGCT ATCATCGCGG GCCCGGTGTG GGTTCGCTTC
ACCTGTAACC GTGAAGCCGG CGAATCCCAG CAGGCCTTCC TGTCTGCGCG CACGGTGGCT
CAAGCAGAAG AGCAGGCAAT GCCCGCGTTC GGCATCACAC TCACCACCGT ACTGCTGCCA
CTGGTGTTGA TGGTCGGCAA AACGTTGGCC GTCACGGCCC TGGACAAGGG CTCTGCGCTG
TACGAGTGGG TGGCGTTCCT GGGCAGCCCA CTGATTGCCC TGACGCTGTC GGTGGTGTTC
GCCTACTGGG CACTGGGCTT GCGCCGCGGC CTGGATATGG CAGACCTGCT GAGCCTGACC
CAGCGCTGTT TCCCTCCCCT GGCCGGCATT CTGCTGATCA TCGGTGCCGG CGGTGCCTTC
AATGACATGC TCGTGGGCAG CGGCATCGGC AAGGCACTGG CCGATGTGCT GAACCAGACG
CAGCTCAACC CGATCCTCCT CGCCTGGTTG ATTGCCGGGA TCATGCACTT TGCCGTCGGC
TCGGCCACCG TCGCGATGAT CAGCGCGGCC GGCATGGTAA TGCCAATCCT TGGCCAGCAC
CCGGAATACA ACCGGGAAAT CCTGGTGATC GCCATCGGCG CCGGCGCCAT CGGCTGGACC
CACATCACCG ACTCGGCGTT CTGGGTGGTG AAGGAGTACC TGGGCCTTTC CCTGAGTGAT
GCACTGAAGA AGTTCACTGC CGCTACAGTG CTGGCCTCGG TAGTCGCCTT GTGCCTGACC
CTGCTCCTTT CGAAGATTGT CTGA
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| Protein sequence | MGANQQEART EAISDRENHT MTPTFSLLVL GTAILLIVVM ISKLKVHPFL ALMAASLVVG
VGTGMAPTAI VAAFEKGMGS TLGFLAGIIG LGSILGKLLE ESGGARRIAT TLLNRLGERN
TSWAMMLVGF IAGIPVFFEV GFVLLIPLIY VVARQTRISM LYLGVPLVTS LMVVHCILPP
HPAATAITGM LNADIGTVIL YGLIVGLPTA IIAGPVWVRF TCNREAGESQ QAFLSARTVA
QAEEQAMPAF GITLTTVLLP LVLMVGKTLA VTALDKGSAL YEWVAFLGSP LIALTLSVVF
AYWALGLRRG LDMADLLSLT QRCFPPLAGI LLIIGAGGAF NDMLVGSGIG KALADVLNQT
QLNPILLAWL IAGIMHFAVG SATVAMISAA GMVMPILGQH PEYNREILVI AIGAGAIGWT
HITDSAFWVV KEYLGLSLSD ALKKFTAATV LASVVALCLT LLLSKIV
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