| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3068 |
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| Symbol | |
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| ID | 5194611 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3451173 |
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| End bp | 3451895 |
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| Gene Length | 723 bp |
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| Protein Length | 240 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587514 |
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| Product | proteasome-type protease-like protein |
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| Protein accession | YP_001268380 |
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| Protein GI | 148548278 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.308657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTACT GTGTCGCCAT GCACCTGGAG GACGGGCTTG TCTTCATCAG CGACTCACGC
ACCAACGCCG GCATCGACCA GATCTCCACG TTCACCAAGT TGTTCGTCTT CAGCGCCCCG
GGCGAGCGGC TGATCGTGCT GCAGACCGCC GGCAATCTGG CGACCTCGCA GTCGGTGGTA
AACCTGCTGC AGCAACGCAC CCAGGGCAAC GGCCCCCATC TGCTGAACGT TGCCACGCTC
TACGATGCAA CGGTGCTGGT CGCCGACACC CTGCGCGAGG TGGTCAAAAG AGACCACAGC
AAGCTCACGG CCGATATCGA CCTTAGCAGT TCATTCATCG TCGGCGGCCA GATAGCCGGC
GGCCCCATGG CCATCTACAA CGTGTATGCA CAAGGCAATT TCTTCCAGGC CACACCGGAC
ACCCCGTTTC TGCAACTGGG TGAAAGCAAG TACGGCAGAC CAATACTCGA CCGCAACCTG
GATTACCGCA CGCCGCTCGA TGAAGCGCTG CGCTGCGGCC TGATTTCGTT CGACTCCACC
ATCCGCAGCA ACCTGTCGGT GGGCATGCCG CTGGACTTGC TGGTGTACCG CAACAACAGC
CTGGAAAGCA TGACGCGCAA GCGCATTACC AGCGACGATG CCTATTACCA GCAGATTCGC
AGGCAGTGGA GCGACGGCTT GAAAACCCTG CTGGCCGAAC TGCCAGCGCC GCCTTATGGC
TGA
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| Protein sequence | MTYCVAMHLE DGLVFISDSR TNAGIDQIST FTKLFVFSAP GERLIVLQTA GNLATSQSVV
NLLQQRTQGN GPHLLNVATL YDATVLVADT LREVVKRDHS KLTADIDLSS SFIVGGQIAG
GPMAIYNVYA QGNFFQATPD TPFLQLGESK YGRPILDRNL DYRTPLDEAL RCGLISFDST
IRSNLSVGMP LDLLVYRNNS LESMTRKRIT SDDAYYQQIR RQWSDGLKTL LAELPAPPYG
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