| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3060 |
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| Symbol | |
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| ID | 5193579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3443158 |
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| End bp | 3444708 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587506 |
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| Product | BCCT transporter |
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| Protein accession | YP_001268372 |
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| Protein GI | 148548270 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.892998 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC CAACTACCTT GCAGGCCGAC GGCCAGGCCA TGGGCCTGCC TATGGCACGC
GATATCGACT GGCCGTTGTT CCTGATCAGC GGCGGATTCC TCGGCGCCTT CCTGCTGGCG
GCGCTGATCG ACATCGACAC CGTGTCGGCG CTGGTCAATA CCCTGTTCGC CTGGTCGACA
AAGGCCTTTG GCCTCTATTG GCAAGTGCTG ATGCTGGCAA CCTTCGCCGT CAGCCTGTTC
ATCGGTTTTT CCAGATGCGG GCGTGTACGC CTGGGCGGGG TCACCCAGCG CCCGGACGTC
AGCACCTTCA ACTGGATCGC CGTGATCATG TGCGCCCTGC TGGCAGGTGG TGGCGCCTTC
TGGGCCGCTG CCGAACCCTT GATGCACTTT GCCAGCCCAC CGCCCTTCTT CGCCGGCCTG
CAACCGCACA GCGAAGCGGC GGCCACCGCG GCACTGGCGC AATCGTTCGT GCACTGGGGC
TTCCTGGCCT GGGCCGTGCT GGGCAGCCTG CTGGCGATCG TGCTGATGCA CCTGCATTAC
GATAAAGGCC TTCCGCTGGC GCCGCGCACC CTGCTTTACC CCCTGTTCGG CCAGCGAGCG
CTCAAGGGCC CGATCGGCAC CTTGGCCGAC GCTGCCTCGA TCATCGCGGT AGTGGCCGGC
ACCATCGGTC CGATCGGTTT CCTTGGCCTG CAGATCAGCA GCGCCATGCA CGCCGTGTGG
GGGTTGCCCA ACACTATCGT CACCCAGTCG CTGACCATTG TCCTGGTGAC CGCGATGTAC
ACCGTCTCGT GCCTGGTGGG CCTCAAAGGC ATCCGCTTTG TCAGCGAGAT CAACGTCTGG
TTGATGATCG GCCTGGCCCT GTTCATGGTG GTATTCGGAC CGACGCTGTT CATCCTCGGC
GGTTTCCCGG CGGCCTTTGC CCTGCACGTG GAGCACTTCA TCCCCCTGAC GATGTTCCGC
GCCGACCCCA AATGGCTGGA CTGGTGGACG GTGTTCTACT GGGGCTGGTT CATCGGCTAC
GCGCCCATGG TGGCACTGTA CGTCGCGCGG ATCTCGCGGG GCCGCACCAT CCGCGAGATC
ATCATGACGC TGTCGATCAT CGCACCGCTG GTGACCATGT TCTGGTTCAC CGTGGTAGGC
GGTACCGGGA TCGGCCTGGA GCTGCAAACA CCAGGCATCG TCACCGCCCA TGGCGCCAAG
CCTGAAGACC TGTTGCTGGG AGTGACGCAG AACCTGCCAC TGGGTGGCCT TGTCAGCGCG
CTGTTCCTGT TCTTGAGTTT TATCTCGGTG GCCACCAATG GCGACGCCAT GGCCTTCACC
GTGGCGCTGG CGATGTCCAG CAACGATAAA CCGAAGAAGT GGTTGCGCGG TTTCTGGGCA
ATCGGCATGG GCCTGGCGGC GGTGGTACTG ATCACCATTG GCGCAGGCGG GGTGACGGCC
CTGCAATCCT TCATTGTCAT CACCGCGGTG CCGGTGTCGC TGGTGATCCT GCCAGCGCTG
TGGGATGCCG TGCGCATCGC TCGACACATG GCCCGTGAAC AAGGCGTCTG A
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| Protein sequence | MKNPTTLQAD GQAMGLPMAR DIDWPLFLIS GGFLGAFLLA ALIDIDTVSA LVNTLFAWST
KAFGLYWQVL MLATFAVSLF IGFSRCGRVR LGGVTQRPDV STFNWIAVIM CALLAGGGAF
WAAAEPLMHF ASPPPFFAGL QPHSEAAATA ALAQSFVHWG FLAWAVLGSL LAIVLMHLHY
DKGLPLAPRT LLYPLFGQRA LKGPIGTLAD AASIIAVVAG TIGPIGFLGL QISSAMHAVW
GLPNTIVTQS LTIVLVTAMY TVSCLVGLKG IRFVSEINVW LMIGLALFMV VFGPTLFILG
GFPAAFALHV EHFIPLTMFR ADPKWLDWWT VFYWGWFIGY APMVALYVAR ISRGRTIREI
IMTLSIIAPL VTMFWFTVVG GTGIGLELQT PGIVTAHGAK PEDLLLGVTQ NLPLGGLVSA
LFLFLSFISV ATNGDAMAFT VALAMSSNDK PKKWLRGFWA IGMGLAAVVL ITIGAGGVTA
LQSFIVITAV PVSLVILPAL WDAVRIARHM AREQGV
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