Gene Pput_3058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_3058 
Symbol 
ID5190963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3440660 
End bp3442102 
Gene Length1443 bp 
Protein Length480 aa 
Translation table11 
GC content65% 
IMG OID640587504 
Productaldehyde dehydrogenase 
Protein accessionYP_001268370 
Protein GI148548268 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCACACA AGACCTACAA CAACTACATT GATGGCCAGT GGTGTGAAGG CCACGCCACT 
TTGGGCAACT ACAGCCCCTC GGACACTGGC GACCTGATCG GCCAGTACCA TCAGGCCAGC
GCCGAACAGG CCCGCCAGGC CATCCAGGCC GCCCGCGCCG CTCAACCCCT GTGGGCCGCC
AGTGGCCTGG AAAGCCGCCA ACAAGTGCTG ATGGCCATCG GCGACGAGCT GATCGCCCGC
AAGGAAGAAC TCGGCGAACT GCTGTCGCGA GAAGAAGGCA AACCCTTGGC CGAAGGCATC
GGCGAGGTCA ACCGCAGTGG CCAGTTCTTC CATTACTACG CCGCCGAAGT GCTGCGTCAG
ATGGGCGAGA CTGCCGCCTC GGTGCGCCCA GGGGTCGACA TCGAAGTGCA TCGCGAACCG
GTGGGTGTGG TGGGCATCAT TACCCCATGG AACTTCCCCA TGGCCACCGC CGCCTGGAAA
ATCGCCCCGG CCTTGGCCTT CGGCAACGCC GTGGTGTTCA AGCCGGCCAA CCTGGTGCCG
GCCAGTGCCT GGGCGCTCAC CGAGATCATC AGCCGTCAGG GCCTGCCCAG CGGTACCTTC
AACCTGGTGA TGGGCAGCGG TGCCGACGTC GGCGAGGCCC TGATCCAGTC CGCCGAGATC
GATGCCCTGA CGTTCACCGG TTCTCTGCAG ACGGGCCGAC GCGTAGCGGT GGCCACCGCC
GGTAACCTGG TGCGCTGCCA GCTGGAAATG GGTAGCAAAA ATGCCTTGGT GGTCATGGAC
GACGCCGACC TCGAACTGGC CGTGGAATGC GCGCTCAACG GGGCCTTCTT TGGCACTGGG
CAGAAATGCA CTGCGTCATC ACGGCTGATC GTCTGCGACG GCATCCACGA CCGCTTCGTC
GAGGCGCTGC GCCTGCGCAT GCGCCAGCTC AAGGTCGGCC ATGCACTGGA GGCTGGCGTC
CAGATCGGCC CGGTCGCTGA CGCGCGCCAG CTGGAACAGA ACCTGGCCTA CCTGCAATTG
GCCCAGGCCG AAGGCGCCAC CCTGATAGAA GGCGGCGAGC GCCTGCAATT GGCCTCCGAT
GGCTACTACA TGCGCCCAGC CTTGTTCATC AACAGCCGCA ACGACATGCG CATCAACCGC
GAGGAAGTGT TCGGCCCCAT CGCCTGCGTG ATCCGCGTGC GCGATTTTGA AGAGGCGCTG
GCCACGCTCA ACGATACCGA GTACGGCCTC ACAGCCGGGA TCATCACCCA GTCGCTGCGC
CACGCCAGCC ACTTCAAGCG CCGCGCCCAG ACCGGCTGCG TGATGGTCAA TCTGCCCACC
GCCGGGACCG ACTACCACGT GCCATTCGGG GGCCGCAAAG CCTCGAGTTT CGGCCCCCGG
GAACAGGGGC AATACGCTCG CGACTTCTAC ACCGTGGTCA AGACCACCTA CCTGCGGCCC
TGA
 
Protein sequence
MSHKTYNNYI DGQWCEGHAT LGNYSPSDTG DLIGQYHQAS AEQARQAIQA ARAAQPLWAA 
SGLESRQQVL MAIGDELIAR KEELGELLSR EEGKPLAEGI GEVNRSGQFF HYYAAEVLRQ
MGETAASVRP GVDIEVHREP VGVVGIITPW NFPMATAAWK IAPALAFGNA VVFKPANLVP
ASAWALTEII SRQGLPSGTF NLVMGSGADV GEALIQSAEI DALTFTGSLQ TGRRVAVATA
GNLVRCQLEM GSKNALVVMD DADLELAVEC ALNGAFFGTG QKCTASSRLI VCDGIHDRFV
EALRLRMRQL KVGHALEAGV QIGPVADARQ LEQNLAYLQL AQAEGATLIE GGERLQLASD
GYYMRPALFI NSRNDMRINR EEVFGPIACV IRVRDFEEAL ATLNDTEYGL TAGIITQSLR
HASHFKRRAQ TGCVMVNLPT AGTDYHVPFG GRKASSFGPR EQGQYARDFY TVVKTTYLRP