| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3057 |
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| Symbol | |
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| ID | 5190962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3439677 |
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| End bp | 3440564 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587503 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001268369 |
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| Protein GI | 148548267 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGCCCG AGCTGAAAAT CGCGCAGTTG CGTTACTTCG TACTGGTCGC CGAACAAAAG
AGTTTCCACG CGGCCGCCCG CCAAGCCTTT CGCACCCAGC CTGCGATATC CCTGGCCCTG
CGTGAACTGG AGCAGAAGCT GGGGCAGGCA CTGGTCGAAA AGGGCGGTGG CCGGGTAGAG
CTGACGCCAT ATGGCGAGCA TTGCCTCCCG TTGTTTCGGG GCTTGATTGA GCACCATGAC
CGTATTGCCC GTGAAGCCAT GCTGTTTGCC CGGCATGAAA TCGGCCAGGT CAGCATCGCC
ACCGTGCCTT CTGTGGCCAG CCGAATGCTG CCAGGGCCGC TGGCCCGCTT TGTGGCCGCG
CACCCCAATG TTCAGGTCAG CATTCAGGAC GGCACGGCCG AACGTGTGCA GCAGTTGCTC
GCTCAAGGGC AAGTGGATTT CGGCATCAGC AGCCTGTGGG TGGACGATGA CCAGCTCGAA
TTCGCCCCCA TCGTGAATGA TCAGGTTGGC GTGGTGTGCC GCAGCGACCA CCCGCTGGCG
CAGGCGGGGG GGCAGCTGCA TTGGGCGCAG TTGCTGGGCG TGCCGATGAT CCGCAACGGT
ACCTCGCAAT TACTGGCGGG TACCGAGGCC GAGGGTTTGC TGGCCGATAG CCGGCTGTTC
ATTTCCAACA TGATTTCGTT GATCGCCATG CTGGAGGAGG GGGTAGGGAT CAGTACCTTG
CCGTACCTCG CTTTTCCGCA GGAGAACGAA AAACTGGCGT TCGTACCCCT TGTGGAGCCC
AAGGTAGAAC GGCACATCGG CATGCTCACC CGCAAAGGGC GCAGCTTGTC ACCTGTGGCG
GGGGCACTGA TGGCGTTTCT GCAAGTGCAG TTGGCGAAGG CTGGCTGA
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| Protein sequence | MLPELKIAQL RYFVLVAEQK SFHAAARQAF RTQPAISLAL RELEQKLGQA LVEKGGGRVE
LTPYGEHCLP LFRGLIEHHD RIAREAMLFA RHEIGQVSIA TVPSVASRML PGPLARFVAA
HPNVQVSIQD GTAERVQQLL AQGQVDFGIS SLWVDDDQLE FAPIVNDQVG VVCRSDHPLA
QAGGQLHWAQ LLGVPMIRNG TSQLLAGTEA EGLLADSRLF ISNMISLIAM LEEGVGISTL
PYLAFPQENE KLAFVPLVEP KVERHIGMLT RKGRSLSPVA GALMAFLQVQ LAKAG
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