| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3048 |
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| Symbol | |
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| ID | 5190877 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3430279 |
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| End bp | 3431463 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587494 |
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| Product | amidohydrolase |
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| Protein accession | YP_001268360 |
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| Protein GI | 148548258 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
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| TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0406772 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTATTT TGCAGAGCAA TCAAACACGG GGCTCAGCTG CCGAGCTGAA TGAGTTCGTC
ATGCTGCGCC GGCAGATCCA CGCTGCGCCG GAAATTGGCG GCGACACCCC CGATACAGCG
GCCCTGGTAG CCGACAAGCT GCAAGCGTTG GGCTATGAAG TGCATCGCAA TGTAGGTGGG
CATGGTGTGG TCGGCGTGCT GAAAGTGGGG GACAGCCCGC GCAGCATCGG TTTGCGTGCA
GACATGGACG CACTGCCCAT GGGCGAAAAG AATGCGTTTG CGCATGCCAG CAAGATCCCC
GGCCGGATGC ATGCCTGTGG CCATGACGGG CATACCGCGA TCCTGCTGGC AGCCGCTGCG
CAACTGGCGG CTACACGCCA GTTCAACGGG ACGTTGAACG TGATATTCCA GCCCGACGAG
GAAGGCCTGG CGGGGGCCAA GGCGATGATC GACGACGGCC TGTTCGAGCG TTTTCCGTGC
GACTCGGTGT ATGCGCTGCA TAACATGCCC GGCCTGCCGG TGGGCACGTG CGTGGTGCAG
GCGGGGCCCA CCATGGCGTC TTCCGAACGC GTCAGCATTC GGATTACTGG CAAAGGCGGG
CACGGTGCGA TGCCGGAGCT GTCGGTAGAC CCGGTGATGG CGTTGAACAG CCTGATCAGT
GGCATCCAGA CCATCAAGTC GCGCAACCTG AGCGTCGAGG ACTACGCCGT GATCAGCATC
GGCATGATCC AGGCCGGCAC CGTCTACAAC ATCATCCCTG ACGAGGCCTG CATGTTGCTG
AGCGTGCGCA CCGACACGGC CCAGACCCAG CAGAAGATCA ACAGCCGCAT TGACGCCCTG
GCCAAGGGGC ACGCAGAAAG CTATGGCGTG GAGATCGAGG TGCAATTCAC CCAACTGGCG
CCCGCCTTGT GCAACAGCGA TCACGAAAGC GCGTTGCTGC GTGACAGCCT GAGGCCGTTG
TTCGCCGACG GCGCGCTGCT GGACAAGATG CCGAAGAAGG TCATGGGCAC CGAAGACTTT
GCCTACATGT TACAGGCGCG GCCTGGCTGT TACTTCATGC TGGGCAATGG CACGGGCGAG
TTCCATGGGT GCTCGGTGCA TAACCCCCAC TACGATTTCA ATGATGCGTT GGTGAAAATT
GGCGCTGATT GTTGGGTGAA GTGGGTTCAG GACTATCTGC GTTGA
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| Protein sequence | MGILQSNQTR GSAAELNEFV MLRRQIHAAP EIGGDTPDTA ALVADKLQAL GYEVHRNVGG
HGVVGVLKVG DSPRSIGLRA DMDALPMGEK NAFAHASKIP GRMHACGHDG HTAILLAAAA
QLAATRQFNG TLNVIFQPDE EGLAGAKAMI DDGLFERFPC DSVYALHNMP GLPVGTCVVQ
AGPTMASSER VSIRITGKGG HGAMPELSVD PVMALNSLIS GIQTIKSRNL SVEDYAVISI
GMIQAGTVYN IIPDEACMLL SVRTDTAQTQ QKINSRIDAL AKGHAESYGV EIEVQFTQLA
PALCNSDHES ALLRDSLRPL FADGALLDKM PKKVMGTEDF AYMLQARPGC YFMLGNGTGE
FHGCSVHNPH YDFNDALVKI GADCWVKWVQ DYLR
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