Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_3036 |
Symbol | |
ID | 5193559 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3421051 |
End bp | 3421521 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640587482 |
Product | protein tyrosine phosphatase |
Protein accession | YP_001268348 |
Protein GI | 148548246 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.294827 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGTCC TGTTCATGTG CACGGCCAAC AGCTGCCGCA GCATCCTTTC CGAAGCAATG TTCAACCACC TGGCACCGCC CGGTTTCGAG GCAGTCAGCG CTGGCAGTTT CCCCAAGGGC CAGGTGCTGC CACGCAGCCT GAGCACGTTG CAGCAGGCCA ATATCTCGAC CCAGGGCTTG AGCAGCAAAG GCAACGATGC GTTCGAGGGC AACCCACCCG ACATCGTCAT TACCGTCTGC GACAAGGCAG CGGGCGAAGC CTGCCCGGTG TATTTCGGCC CTGCGCTGAA GTCGCATTGG GGGCTGGAAG ACCCCTCCGA TGTCGTGGGT GACGAAGCAT CGGTCGATGC GGCGTTCCGG GCCACACTGG CCCGCATCGA GTCTCGCTGC CAGGCCTTCT TCGCGCTGCC GTTCGATCAC CTCGACCGCG AGCAGCTCAA GCACGCGCTG GATCGCATCG GCTCGCTTTG A
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Protein sequence | MRVLFMCTAN SCRSILSEAM FNHLAPPGFE AVSAGSFPKG QVLPRSLSTL QQANISTQGL SSKGNDAFEG NPPDIVITVC DKAAGEACPV YFGPALKSHW GLEDPSDVVG DEASVDAAFR ATLARIESRC QAFFALPFDH LDREQLKHAL DRIGSL
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