| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3031 |
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| Symbol | |
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| ID | 5192850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3417397 |
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| End bp | 3418254 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640587477 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001268343 |
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| Protein GI | 148548241 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACT ACCCTACCCC GCCATTCCCT TCCCAACCGC AAAGCGTTCC CGGTTCCCAG
CGCGAGATGG ATCCTTATCC GGACTGCGGT GAGCAGAGCT ACACCGGCAA CAATCGCCTC
GCAGGCAAGA TCGCCTTGAT AACCGGTGCT GACAGCGGCA TCGGGCGTGC GGTGGCCATT
GCCTATGCCC GAGAAGGCGC TGACGTTGCC ATTGCCTATC TGAATGAACA CGACGATGCG
CAGGAAACCG CGCGCTGGGT CAAAGCGGCT GGCCGCCAGT GCCTGCTGCT ACCCGGCGAC
CTGGCACAGA AACAGCACTG CCATGACATC GTCGACAAGA CCGTGGCGCA GTTTGGTCGC
ATCGATATCC TGGTCAACAA CGCCGCGTTC CAGATGGCCC ATGAAAGCCT GGACGACATT
GACGACGATG AATGGGTGAA GACCTTCGAT ACCAACATCA CCGCCATTTT CCGCATTTGC
CAGCGCGCTT TGCCCTTGAT GCCAAAAGGC GGTTCGATCA TCAACACCAG CTCGGTCAAC
TCGGACGACC CGTCACCCAG CCTGTTGGCC TATGCCGCGA CCAAAGGTGC CATTGCCAAT
TTCACTGCAG GCCTTGCGCA ATTGCTGGGC AAGCAGGGCA TTCGCGTCAA CAGCGTCGCA
CCCGGCCCGA TCTGGACCCC GCTGATCCCG GCCACCATGC CTGATGAGGC GGTGAGGAAC
TTCGGTTCCG GTTACCCGAT GGGGCGGCCG GGACAACCTG TGGAGGTGGC GCCAATCTAT
GTCTTGCTGG GGTCCGATGA AGCCAGCTAC ATCTCGGGTT CGCGGTACGC CGTGACGGGG
GGCAAACCTA TCCTTTGA
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| Protein sequence | MSDYPTPPFP SQPQSVPGSQ REMDPYPDCG EQSYTGNNRL AGKIALITGA DSGIGRAVAI
AYAREGADVA IAYLNEHDDA QETARWVKAA GRQCLLLPGD LAQKQHCHDI VDKTVAQFGR
IDILVNNAAF QMAHESLDDI DDDEWVKTFD TNITAIFRIC QRALPLMPKG GSIINTSSVN
SDDPSPSLLA YAATKGAIAN FTAGLAQLLG KQGIRVNSVA PGPIWTPLIP ATMPDEAVRN
FGSGYPMGRP GQPVEVAPIY VLLGSDEASY ISGSRYAVTG GKPIL
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