| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3028 |
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| Symbol | |
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| ID | 5195375 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3415297 |
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| End bp | 3415989 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 640587474 |
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| Product | membrane protein-like protein |
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| Protein accession | YP_001268340 |
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| Protein GI | 148548238 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2323] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGTTTCGT TTGATCTGCA GCGGATGCTG ATAGGCGACT TTCCCTTTAC CTTTCTGCTG
GAGGTCGCTG TGCGTGTTTC AGCGGCCTTC CTGGCCGTGT TCTTCTTTTT GAAATTTAGT
GGCCGGCGCG GGATCAGACA GCTGTCCCGG TTCGAGCTCG TGGTCATTCT CACCCTGGGC
TCAGCTGCCG GCGATGTGAC CTTTTACGAG GACGTACCGC TGCTTCCGGT GGCCTTGGTT
TTCCTCACCC TGTTCATGCT TTACCGAGGA ACGGTCTACC TCATGAGGCG AAACAGAACC
TGCGAAGCCT GGATCGACGG GCTGCCAGTC ACGGTAGTGA AAGAGGGCAT GTACGAAATC
CATTCGCTGC GTCACATGAA CATTTCACCA AATGAGCTGT TCATGGAGCT ACGCCAGCAA
GGTGTCGAGC ACCTGGGCCA GGTTCGACTG GGCCTTCTGG AAACCGATGG CGATCTCAGT
TTGTATTTCT ACGATCAGCA AGACACACGC CCAGGCCTGT CAGTGCTGCC GGTCGAGCAT
CGCCCGGAGT ACACATCCCC GCCCGGCGCC GGGGTGCATT GCTGCGTGAG CTGTGGTTTC
CCGGCCTACC ATGAGCCTCA TGACACCCTG GCGTGTTCAC GTTGCGGTCA TACGGTCTGG
TCGCCTGCAT TGGATACCGT GCGCAACCGT TAG
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| Protein sequence | MVSFDLQRML IGDFPFTFLL EVAVRVSAAF LAVFFFLKFS GRRGIRQLSR FELVVILTLG
SAAGDVTFYE DVPLLPVALV FLTLFMLYRG TVYLMRRNRT CEAWIDGLPV TVVKEGMYEI
HSLRHMNISP NELFMELRQQ GVEHLGQVRL GLLETDGDLS LYFYDQQDTR PGLSVLPVEH
RPEYTSPPGA GVHCCVSCGF PAYHEPHDTL ACSRCGHTVW SPALDTVRNR
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