| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3027 |
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| Symbol | |
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| ID | 5195374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3414431 |
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| End bp | 3415201 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587473 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001268339 |
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| Protein GI | 148548237 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCTGA TAAACGACCT TCAGACACCC GCCAACGTGC TGGTCTGCGG GGCCAGCCAA
GGGATTGGCC TGGGATTGTG CACACAGTTG CTGGCGCGCG ATGACATCGG GCTGGTGTTC
GCCGTTTCGC GACGCGCCAC CACCAGCCCT GCGCTGGAGA CCTTGTTCAC AGAGCACGCG
CGACGGTTGG TTCGCCTCGA CTGCGACGCC CGATCCGAGC AGGCACTGCA AACACTGGCC
GCGCAGGTGG GCGCCTGCTG CGACCAACTG AACCTGGTCT TCAGCACGCT TGGCGTGCTG
CAAGAAGGCC CGGCGAGGGC TGAAAAAGCA CTGACCCAGC TAGACATGGC GGGGTTGCTG
AGCACTTTCA CAACCAACTG TTTCGCCCCT GTTCTGCTGC TCAAGTATTT GCTGCCGCTG
CTGCGTCGGC AACCGATGGC CTTCGTCGCC TTGTCGGCGC GGGTTGGGTC GATCGGCGAC
AATCACCTGG GTGGGTGGTA CAGCTACCGT GCCAGCAAAG CCGCGCTCAA TCAGCTTCTG
CGCACTGCAA GCATCGAGCT GAAGCGACTG AACCCCGCGT CGACGGTACT TGCATTGCAT
CCCGGCACCA CCGACACCCA GCTTTCCCGA CCCTTTCAGG GCAATGTGCC GCCAGGCAAA
CTGTTCTCGC CCGCGTTTGC CGCCACCTGC ATCCTGGCGC TTGTGAGCCG TCACGGCCCG
GCGCAGAGCG GAACGTTCTG GGCGTGGGAC GGCACGCCGA TTCCCTGGTG A
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| Protein sequence | MSLINDLQTP ANVLVCGASQ GIGLGLCTQL LARDDIGLVF AVSRRATTSP ALETLFTEHA
RRLVRLDCDA RSEQALQTLA AQVGACCDQL NLVFSTLGVL QEGPARAEKA LTQLDMAGLL
STFTTNCFAP VLLLKYLLPL LRRQPMAFVA LSARVGSIGD NHLGGWYSYR ASKAALNQLL
RTASIELKRL NPASTVLALH PGTTDTQLSR PFQGNVPPGK LFSPAFAATC ILALVSRHGP
AQSGTFWAWD GTPIPW
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