| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3012 |
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| Symbol | |
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| ID | 5190276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3402282 |
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| End bp | 3403919 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640587458 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_001268324 |
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| Protein GI | 148548222 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCAACA AGCGCAGGTT CGGGCGGGCT GCTGGGCTAA TGCTACTGAT CCACGTGCTG
TTCTCGCCCC TGCTCCATGC GGACACCCCT CAGCCTGGGC CAGAGATAGA GGGTGTGATT
GCCGAACCCG CGCCGCTGAC CGTCATCAAC CGCACGGTGC TGGTCTTTCG TGCGACGCTG
CTGGGCGAAA CACCCACGGT GCGTGCCCAG CGCGCCAAGA AGGTCATCGA GGATACGCTT
CAGGAAACAA ACGATCTGGA GGTTCGCGTC GACCCTATCC TGCACAGCTA CCTGGTGCTG
CTGGGCGGGC GCCGTGCATT CATCGTGACG CCACTGGATG CTGCGGCCGA TACCATTACC
ACAGGCGAAG CCGCCGAGCA GGCCGCCGAG AACCTGCGCC TTGTTGTCGA GGAAACCCGC
CAGGCGCGTA GCCTGCGGTT CTTGCTCACC GCGATAGGCT ACAGCGCTGC AGCAACCTTG
GTCTTTTTCA TGCTGGTAAA GGCCGCAGGC TACTGTCGAC GCAAGCTCCT TGGACTGCTG
CCTAAACTGA TGGGCAAACA CTCCGAGCGC CTTAAGGTCG GCCACACGCA ACTGTTCGAC
CTGCAGAACC TGTACTACCT GATCGACCGC TCACTCTGGC TGCTGTACTG GTTGGTCGTG
TTGTTGTTCT GCTACCAATG GCTGGGCTTC GTGCTGTCTC AGTTCCCCTA CACAAGGTCT
TGGGGGGAAA GCCTCAATAT CCACCTGATG GCGCTGCTCA ACTACCTGAT CAGCGGTATT
TTGCGTGCCA TGCCCGGCCT GGCCGTTGCA TTGTCGATCT TCTTCATCGC CCGGGGCATC
AGCGCTTTCT CCAAACGTGT GCTAAGGCGC ATGGCACGCC CGGGCACATT GAAATGGCTG
ACCGCCGAAA CCTTGCAACC GACCATGCGC CTGACGTCGC TGGCGATCTG GCTCTTCGCC
CTGGTGATGG CCTACCCCTA TCTACCCGGC TCGGGTACCG ATGCCTTCAA GGGGTTGTCA
GTGTTGCTCG GTCTGATGGT TTCACTGGGG GCGACCAGTG TCATCGGCCA AGGCGCCGCC
GGACTGATTC TCACCTACAC GCGCACGCTG CGCGTCGGTG AATTTGTACG TGTGGGTGAT
TACGAGGGCA CGGTGACCGA AGTGGGCATG TTCACCACGA CCATTCGCAC CGGGCTTGGC
GAGGTGCTGA CACTTCCCAA CTCGATGATT ACCGGCTCGG TGACCAAGAA CTACTCACGA
ATCGTGCAAG GGCCAGGCTA TGTGGTCGAC ACCGTGGTGA CCATTGGCTA CGACACCCCG
TGGCGTCAGG TCGAGGCGAT GTTACTGGAA GCGGCTCGGC GCACCGACGG CGTGCTGCAA
ACGCCCATGC CCCAGGTATT CCAGACGGCA CTGTCGGACT TCTACCCCGA GTATCGATTA
GTGGCCCAGG CCATCCCGTC AGAGCCCAGG CCACGCGCGC AGCTTTTGAG CCTGTTGCAC
GCCAATATCC AGGACGTGTT CAACGAGTAT GGGGTGCAAA TCATGTCGCC TCACTACCTG
AGCGATCCCG AGCAGCCCAA ATGGGTGCCC AAGGAGCAGT GGCACGCGGC CCCGTCCAAA
CCTGAAAACA CCGCGTGA
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| Protein sequence | MGNKRRFGRA AGLMLLIHVL FSPLLHADTP QPGPEIEGVI AEPAPLTVIN RTVLVFRATL
LGETPTVRAQ RAKKVIEDTL QETNDLEVRV DPILHSYLVL LGGRRAFIVT PLDAAADTIT
TGEAAEQAAE NLRLVVEETR QARSLRFLLT AIGYSAAATL VFFMLVKAAG YCRRKLLGLL
PKLMGKHSER LKVGHTQLFD LQNLYYLIDR SLWLLYWLVV LLFCYQWLGF VLSQFPYTRS
WGESLNIHLM ALLNYLISGI LRAMPGLAVA LSIFFIARGI SAFSKRVLRR MARPGTLKWL
TAETLQPTMR LTSLAIWLFA LVMAYPYLPG SGTDAFKGLS VLLGLMVSLG ATSVIGQGAA
GLILTYTRTL RVGEFVRVGD YEGTVTEVGM FTTTIRTGLG EVLTLPNSMI TGSVTKNYSR
IVQGPGYVVD TVVTIGYDTP WRQVEAMLLE AARRTDGVLQ TPMPQVFQTA LSDFYPEYRL
VAQAIPSEPR PRAQLLSLLH ANIQDVFNEY GVQIMSPHYL SDPEQPKWVP KEQWHAAPSK
PENTA
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