| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_3008 |
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| Symbol | |
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| ID | 5191561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3399125 |
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| End bp | 3400021 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587454 |
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| Product | UspA domain-containing protein |
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| Protein accession | YP_001268320 |
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| Protein GI | 148548218 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATACTT ACTCAAGACT GCTGCTGATC TGCCATCCAG ACCTGCACCC TTCGCCTGCC
CTGACGCGTG CTCAAGCGCT GAGCAGTGCG ACAGGTGCTA CCTTGCACCT GGTGGCGCTC
AGTCAATTGC CCTCGCGCCT GGCAACCCTG GACCAGGTGC TACGCAAAAA CGCCCGCAAG
CAGGACGCCG AGCATCGCAA GGCTTGGCTC GCTGAGCAGG TGAAGGCGCT GGGCGAGCTG
GGCATTACCG CCTACGCCGA GACACTGGAC GACCAAGACC CGCTCAAGGA CTTGATCCGG
CTGGCCCAAC TGCACCGGGT CGGGATGGTG ATCAAGGACA TCCAGCACGA AACCGCCTTG
AGCCGTGCCC TGCTCACGCC ATTGGACTGG CAATTGCTAC GCCGCTGCCC GATCCCGCTG
CACCTGGTAG CCCAGGCTGA AACGCAGCTG CCAGCGCGCA TACTGGTCGC CGTGGACCTG
GTCGAGCACG ACCCGGTGAT CGACAAGCTC AACGACCACA TCCTGCAATC GGCACAGGCA
CTGGCACAAC GCTGCAAGGC GCAGCTGCAT TTGCTGCAGG CCTACGAACC CAGCGCCAGT
TTCGTCGCCT ATGCCGCCGC ACCCGTGGCC TGGACCGACA AACTGGTCGA GGAAATGTCC
GGTCGTGCGC GCGAGCGCAT GGCGACGTTC GGCGGCCACT ATGGCATCAA GCCAGACCAC
CTGCACCTGG TGCGGGGCGC TGCCCGTAAC GTGGTCAGCG AATACGCGAA CCAGCAAGGC
TTCGATGTGG TGGTGATGGG CACGCTCTAC CACGAGGGGA TGAGCAAGGT CGTCGGCAGT
ACTACCGAGC AAACCCTGTA CAAGGTTCAC TCCAGTATTC TGGCGATTCA CGGTTGA
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| Protein sequence | MNTYSRLLLI CHPDLHPSPA LTRAQALSSA TGATLHLVAL SQLPSRLATL DQVLRKNARK
QDAEHRKAWL AEQVKALGEL GITAYAETLD DQDPLKDLIR LAQLHRVGMV IKDIQHETAL
SRALLTPLDW QLLRRCPIPL HLVAQAETQL PARILVAVDL VEHDPVIDKL NDHILQSAQA
LAQRCKAQLH LLQAYEPSAS FVAYAAAPVA WTDKLVEEMS GRARERMATF GGHYGIKPDH
LHLVRGAARN VVSEYANQQG FDVVVMGTLY HEGMSKVVGS TTEQTLYKVH SSILAIHG
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