| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2996 |
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| Symbol | |
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| ID | 5190855 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3385390 |
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| End bp | 3386361 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640587442 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_001268308 |
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| Protein GI | 148548206 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1879] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.809705 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCGAA TCCTGACGTT GCTCACCGCC CTGGTGCTGG CATTGGCGGG CGGCCTGACA
CAAGCCGAGG AGGAGGGTGA GGCCGTGCCG TCGCTGGCCG GCAAGCGCAT TGCCGTGAGC
ATGACTGGCA CCAGTCATTA CTTCGACATC AAGGCGTTCC AGGCGCAGGT CAATGAGATC
AAGCGCCTGG GCGGCACGCC GATCACCCTC GACGCCGGGC GCAACGACCG CAATCTGGTC
ACACAACTGA ACACGGTGGT CACGCAAAAG CCCGATGCGG TGATTCAGAC CCTCGGCACC
CTGAGCGTGA TCGACCCCTG GCTCAAGCGC ATCCAGGCAG CAGGCATCCC GCTGTTCACC
ATTGATGTGC CATCGCAGTA CAGCCTCAAC AACACCACCT CGGACAACGT TGCGGCCGGC
CGCGCGTTGG CCGAACAGCT GGTGCGCGAC ACCGGCGGCA AGGGCCGCAT CCTGGTGTTC
AACGGCTTCT ACGGGGTGCC GGTCTGTGCG ATCCGCTACG ACGAGTTGAA GAAGGTACTG
GCCGATCATC CGCAATTGCA GATCGTCCAG CCGGAGCTGC GTGATGTGAT TCCCAACACC
GTGCAGGACG CCCGCAGCCA GATCGCCGCG CTCCTGAACA AGTACCCCAA GGGCGATATC
GCCGCCATCT GGTCGGCCTG GGACATCCCT CAGCTCGGCG CCAGCCAGGC GCTGATCGAC
GCCGGGCGCA GTGAGATCCG CACCTATGGT GTGGACGGCA CGCCGGAGGT ACTGGAGCTG
CTCGCCCCTG ACAACTCGCC CATCGGCGCG GTGGTTGCGC AGCAGCCCGA CCTGATCGGC
CGCACCGCCG TGCGCAACGT TGCCCGCTAC CTGGCCGGCC AGCGTGATCT GCCGAAGGAA
ACCCATGTCG CCGCGCTATT GACGACCCGC GACAACCTGG CTCAGGTCAA GCACCTGCGA
GGTGACCAAT GA
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| Protein sequence | MSRILTLLTA LVLALAGGLT QAEEEGEAVP SLAGKRIAVS MTGTSHYFDI KAFQAQVNEI
KRLGGTPITL DAGRNDRNLV TQLNTVVTQK PDAVIQTLGT LSVIDPWLKR IQAAGIPLFT
IDVPSQYSLN NTTSDNVAAG RALAEQLVRD TGGKGRILVF NGFYGVPVCA IRYDELKKVL
ADHPQLQIVQ PELRDVIPNT VQDARSQIAA LLNKYPKGDI AAIWSAWDIP QLGASQALID
AGRSEIRTYG VDGTPEVLEL LAPDNSPIGA VVAQQPDLIG RTAVRNVARY LAGQRDLPKE
THVAALLTTR DNLAQVKHLR GDQ
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