| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2989 |
|---|
| Symbol | |
|---|
| ID | 5192088 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3377559 |
|---|
| End bp | 3378650 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640587435 |
|---|
| Product | luciferase family protein |
|---|
| Protein accession | YP_001268301 |
|---|
| Protein GI | 148548199 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAC CGATCAAATT CGCCTACTGG GTTCCTAACG TCAGCGGTGG CCTCGTTGTC
AGCAAGATCG AACAACGCAC CAGCTGGGAC ATCGATTACA ACCGCAAGCT GGCGCAGATT
GCCGAGCGTT CCGGGTTCGA GTACGCGCTT TCGCAGATCC GCTTCACCGC CGGCTATGGC
GCTGACAACC AGCACGAGTC GGTAACCATC AGCCACGCGC TGCTGGCCGC CACCGAAAAA
CTCAAGGTGA TCGCCGCGAT CCTGCCCGGA CCCTGGACGC CGGTATTGGC AGCCAAGCAA
TTGGCAAGCA TCGACCAGTT CACCGCGGGC CGCATCGCCA TCAACGTGGT GTCCGGCTGG
TTCAAGGGCG AGTTCCGCGC CATCGGCGAG CCATGGCTGG ACCATGACGA GCGCTATCGC
CGATCCGAGG AGTTCATTCG TGCCCTGAAG GGCATCTGGA CCCAGGACAA TTTCAGCTTC
CACGGTGATT TCTACCGTTT CAACGACTAC ACCCTCAAGC CCAAGCCGCT GCAGCACCCG
CACCCGGAAA TCTTCCAGGG CGGGAGCTCG CGGGCCGCGC GCGACATGGC CTCGAGGGTC
TCCGACTGGT ACTTCACCAA TGGCAACAGT GTCGAGGGCA TCAAGACCCA GGTCGACGAT
ATCCGCACCA AGGCAGCGGC CAACGGGCAT TCGGTGAAGG TCGGGGTAAA CGCTTTCATC
ATCGCCCGCG ACACCGAGGA AGAGGCCCGC GCGGTGCTGG CAGAGATCAT CGCCAAGGCC
GACCCGGAGG CGGTCAACGG CTTTGGCAGT GAAGTCAAGA ACGCCGGTGC GGCCAGCCCG
GAAGGCGAGG GCAACTGGGC CAAGTCGACC TTCGAAGACC TGGTGCAGTA CAACGACGGC
TTCAAGACCA ACCTGATCGG TACGCCACGG CAGATCGCCG AACGCATCGT CGCGCTCAAG
GCGGTCGGCG TCGACCTGAT CCTCTCCGGC TTCCTGCACT TCCAGGAAGA GGTCGAGTAT
TTCGGCAAGC ATGTGTTGCC GCTGGTGCGC GAACTGGAGC AGGAGCAGCA TGCCTCCCTC
GCTGTGGCCT GA
|
|---|
| Protein sequence | MSQPIKFAYW VPNVSGGLVV SKIEQRTSWD IDYNRKLAQI AERSGFEYAL SQIRFTAGYG
ADNQHESVTI SHALLAATEK LKVIAAILPG PWTPVLAAKQ LASIDQFTAG RIAINVVSGW
FKGEFRAIGE PWLDHDERYR RSEEFIRALK GIWTQDNFSF HGDFYRFNDY TLKPKPLQHP
HPEIFQGGSS RAARDMASRV SDWYFTNGNS VEGIKTQVDD IRTKAAANGH SVKVGVNAFI
IARDTEEEAR AVLAEIIAKA DPEAVNGFGS EVKNAGAASP EGEGNWAKST FEDLVQYNDG
FKTNLIGTPR QIAERIVALK AVGVDLILSG FLHFQEEVEY FGKHVLPLVR ELEQEQHASL
AVA
|
|---|
| |