Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2986 |
Symbol | |
ID | 5193475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3374717 |
End bp | 3375598 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640587432 |
Product | inner-membrane translocator |
Protein accession | YP_001268298 |
Protein GI | 148548196 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0559] Branched-chain amino acid ABC-type transport system, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.286251 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATTCT TTTTCGAAGT GCTGATCGGT GGCCTGCTGG CCGGGGTGAT GTACTCCCTG GTGGCCATCG GTTTCGTACT GATCTACAAA GCCAGCGGTG TGTTCAACTT CGCCCAGGGG GCGATGGTAC TGTTCGCCGC GCTGACCTTC GTCAGCCTGC TGGAGCGCGG CGTGCCGTTC TGGCTGTCCT TTCTCGTCAC CCTGGCGACG ATGATCGCCC TGGCGCTGTT GATCGAACGG GCGGTACTGC GGCCATTGGT GGGGCGTTCG CCGATTACCC TGTTCATGGC CACGCTCGGC CTGGCCTACA TCATCGAGGG CGCCGCCCAG GCCCTGTGGG GCGCTCAGGT TCACGGCCTG GAGCTGGCCA TCAGCGACGC GCCGCTGGAA CTGGGTGGCT TGCTGCTGTC GCAGTTCGAC CTGTTCGCCG CCGCAACGGC GGCGGCCCTG GTGGTGCTAC TGTCCTTGCT GTTCAACCGC ACACGCATCG GCCTGGCGCT GCGTGCGGTG GCTGACGATC CCCGCGCGGC GATGAGCGTC GGTATCCGCC TGCCGAGGGT GTGGGCGGTG GTCTGGGCGG TGGCCGGGTT CGTCGGGCTG GTCGCCGGGC TGCTCTGGGG CGCGCGCCTG GGGGTGCAGT TCTCGCTCTC GCTGGTGGTG CTCAAGGCCC TGCCGGTGCT GATCATCGGC GGCTTCACCT CGATCAGCGG GGCGATCGTC GGCGGCCTGA TCATCGGCGC TTCGGAGAAG CTCGCCGAGG TGTACCTCGG GCCGCTCATC GGCGGCGGCA TCGAAAACTG GTTTCCCTAT GTGCTGGCCC TGCTGTTCCT GCTGGTGCGT CCGGCTGGGC TGTTCGGCGA GCGCGCCATC GAGCGAGTCT GA
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Protein sequence | MAFFFEVLIG GLLAGVMYSL VAIGFVLIYK ASGVFNFAQG AMVLFAALTF VSLLERGVPF WLSFLVTLAT MIALALLIER AVLRPLVGRS PITLFMATLG LAYIIEGAAQ ALWGAQVHGL ELAISDAPLE LGGLLLSQFD LFAAATAAAL VVLLSLLFNR TRIGLALRAV ADDPRAAMSV GIRLPRVWAV VWAVAGFVGL VAGLLWGARL GVQFSLSLVV LKALPVLIIG GFTSISGAIV GGLIIGASEK LAEVYLGPLI GGGIENWFPY VLALLFLLVR PAGLFGERAI ERV
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