Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2985 |
Symbol | |
ID | 5193474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | - |
Start bp | 3373637 |
End bp | 3374704 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640587431 |
Product | inner-membrane translocator |
Protein accession | YP_001268297 |
Protein GI | 148548195 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4177] ABC-type branched-chain amino acid transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.538372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGTATC GAGAAGCGGG CCAGTTCAGC GTGCGTTACG CCGACGACCG ACGATTCTTT CGCCTGCGCC AGGATCGGCT GGGTCTGGCG GCCTTGGTCC TGTTCGCCTT CATCGGCGTG CCACTGCTGG GCAATGATTA CTGGTTCAGT GCCATCCTGA TCCCATTTCT ACTGCTGTCG CTGGCCGGCC TAGGGCTGAA CCTGCTGACC GGTTATGCCG GGCAACTGTC CCTGGGTTCG GCGGCGTTCA TGGCAGTAGG TGCCTTCGCA GCCTATAATT TCGAGCTGCG CGTGGCGTGG CTGCCGCTGC TGGCCAGCCT GCTGCTCGGC GGCCTGGTGG CGGCGCTGGT GGCCGTGGTG TTCGGCCTGC CAAGCCTGCG CATCAAAGGC TTCTATCTGC TGGTGTCGAC ACTGGCGGCG CAGTTCTTCG TGCCATGGGC GCTGACCCGC TTCAGTTGGT TCAGCAACGA CAGTGCCTCG GGGGTGATCA GCGCGCCGCC GCTGCTGATG GCCGGGTATG ACTTTTCGTC GCCGGCCGGG CGCTACATGC TGACCCTGGC GGTGGTCAGC GCGCTGTTCT GGCTGGGCGC CAACCTGGTG CGCAGCGAGC TGGGGCGCAA CTGGATGGCG GTGCGCGACA TGGACACCGC CGCCGCAGTG ATCGGCATCC CCCTGTTGAA GACCAAACTG CTGGCTTTTG CCATCAGCGG CTTCTACCTC GGCGTGGCCG GTTCGCTCTG GGCCTTCACC TACCTGGGCA CGGTGGAGCC ACACGGCTTC GACCTGAACC GCTCGTTCCA GATCCTGTTC ATCATCATTA TCGGCGGCCT GGGCAGCATC CTCGGGAACT TCCTCGGCGC CGCCTTCATC GTGCTGTTCC CGGTGCTGCT GTCGAACCTG GCCGGGTTGC TGCCGACCGG GCTGATTGAT GCCGGACAGA TAGAGAACCT ACAGAAGATG GCCTTCGGCA CGCTGATCAT CATCTTCCTG ATCAAGGAAC CGGAGGGCCT GGCGCGCCTC TGGCAACGCT TTCGCGAGCG CACTCGGCGT TGGCCGTTGC GCCACTGA
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Protein sequence | MLYREAGQFS VRYADDRRFF RLRQDRLGLA ALVLFAFIGV PLLGNDYWFS AILIPFLLLS LAGLGLNLLT GYAGQLSLGS AAFMAVGAFA AYNFELRVAW LPLLASLLLG GLVAALVAVV FGLPSLRIKG FYLLVSTLAA QFFVPWALTR FSWFSNDSAS GVISAPPLLM AGYDFSSPAG RYMLTLAVVS ALFWLGANLV RSELGRNWMA VRDMDTAAAV IGIPLLKTKL LAFAISGFYL GVAGSLWAFT YLGTVEPHGF DLNRSFQILF IIIIGGLGSI LGNFLGAAFI VLFPVLLSNL AGLLPTGLID AGQIENLQKM AFGTLIIIFL IKEPEGLARL WQRFRERTRR WPLRH
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