| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2979 |
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| Symbol | |
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| ID | 5193671 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3368488 |
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| End bp | 3369159 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640587425 |
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| Product | ABC transporter related |
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| Protein accession | YP_001268291 |
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| Protein GI | 148548189 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4175] ABC-type proline/glycine betaine transport system, ATPase component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCGCTG ATAAATATCC ACTGATTGCC AACGACCCTT TGGAAACCCC TGCGCGGATC
AGCGCAGACT CCCTTGGCTC TGCATCGATT CCTGCTGTCG CGCTGGAATT TCGCGCGGTC
ACCAAACGTT ACGAGGGGAG CCGGTCGGAC TCCAGCAACG CGGTTGAGCA AGTGAACCTC
GCGGTGCGGC GGGGCGAAGT GCTTTGCTTG ATGGGTACAT CCGGCAGCGG CAAGTCGACT
TTGCTGCGCC ACGTCAACCG GTTGATAGAA CCGAGCAGCG GCGAGGTGCT CATCGACGGT
GAGGCCCTGA GCGACTTGAC GCAGCCTGCG CTGCGCCAAC TGCGGTCGCA GCGCATCGGC
ATGGTGTTCC AGCATTTCGG TTTACTGCCG CATCGAAGCG TGCTCGACAA CGTGGCCTTG
CCCCTGGAAT TGCGCGGTGA GCCGGAGCGT ACACGACGCG CAGCGGCACA ACGGCAGTTG
CAGGCGGTGG GGCTGAAAGC GTGGGGCGAG CGTTTTCCCC ACGAGTTGTC TGGTGGCATG
CAGCAACGGG TCGGGCTTGC GCGAGCAACC ACCCACCGCT GGGTCATCTG GCTGTTGCCT
ATGGCCGGCT TTGCGGCGGG GCTGGTTTAT CACCTGATCG GCAAGCCGGT GAACGCGGCA
ATAACCTACT GA
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| Protein sequence | MIADKYPLIA NDPLETPARI SADSLGSASI PAVALEFRAV TKRYEGSRSD SSNAVEQVNL
AVRRGEVLCL MGTSGSGKST LLRHVNRLIE PSSGEVLIDG EALSDLTQPA LRQLRSQRIG
MVFQHFGLLP HRSVLDNVAL PLELRGEPER TRRAAAQRQL QAVGLKAWGE RFPHELSGGM
QQRVGLARAT THRWVIWLLP MAGFAAGLVY HLIGKPVNAA ITY
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