| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2968 |
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| Symbol | |
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| ID | 5190944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3353480 |
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| End bp | 3356089 |
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| Gene Length | 2610 bp |
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| Protein Length | 869 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640587414 |
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| Product | RND efflux transporter |
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| Protein accession | YP_001268280 |
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| Protein GI | 148548178 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAGAT ACCTGAACTT CGTCGAGCGC TATGCGCGGG CAATTGTGTT CGTGTTGGTG
GCGATCACCG CCTACTTCAC CTACACCCTC GGCGCGCTGA TGTCGGACAC CAATCCGTAT
CTGCTCAAGG ACACTCACCC GGCGCGCAAG ACGATCATTG ATCTGCAGCG CGAGTTCACC
GGCACGTATG ACTCGGTCAT GGTGGCGCTG AACAACCCCG AGAGTGTCTT CAACACCACG
TCGCTGAACG CCCAGTTCGA GCTGTCCCAG GCCATACGCC AGTTGATGCT GGCGAACGAT
GAGGACCGTG TCGAACTGCA GCGCATCGTC GGCCTGCACA GTGGCGACCC TGATGCCCAG
GGTTTGCTGG TGCAGATCCT CGCCGAGGGT TTTTCGCAGA ACGATTACGC TGCCGCCAAA
GCGCTGCGCG ACCATGGGAT TGCCCGGCAC TGGGACAGCC ATGACCTGCA GTTTTTGAGC
TTTCTTGCCG AGCGGCTCAA CCCGATCCAG GAAATGGCCT CGATGGCTGA CCTGGAAAAC
ATCAGCCTGA GTGCCGATGG CGAGTTGTGG ATCCACAAGA CCCTGCACGC CCTGGATATG
GACCCGATCA AGGTCGAAGC GCAGATCATG GGCAACGAGC AGATGGTCGG TGGCGTCGTC
TCGGCGGACA AGAAAGTCGC CATGGTCGTC GCCGAACTGG GCACCAAACA GGACGACGCT
CAGGCCCAGT TGCGTGCCTA TCACCAGGTC CGCGAGATCA TCGCGAAGTA CCAGGCCGCC
CACCCGGAGT TCACCGATGA GGTGTTCATC GCCGGCATGC CGATCTTCAT TGCGGCCCAG
CAGGAAATCA TCGATCACGA CCTGGCGATG CTGTTCCCGA TCGTGTTCCT GTTGGTGACC
TCTCTGCTGG TTTTCTTCTT TCGCAAACCA CTTGGCGTGG TGCTGCCGCT GTTCAATATC
CTGTTCTGCA CCATCTGGAC CCTTGGCCTG ATGGCGCTGC TGCGTGTGCC GATGGACTTG
CTCACCAGTG TCTTGCCGGT GTTCCTGTTC ACCATCTGTT GTGCCGACGC GATCCACGTC
ATGGCCGAGT ATTACGAACA GCTCAATTCG GGTAAGTCTT TCCGCGAAGC CAACCGGGAA
ACCCAGCGCC TGATGGTCAC GCCCGTAGTT TTGACAACGG TCACGACGAT TGCCACGTTC
CTGATCTCCA CCACCAACAA CATTGTCAGC ATCCGCAACT TTGGCGTGTT CATGTCCATC
GGCCTGACGG CGGCGCTGAT CATCTCGTTG CTACTGATTC CGGCGTGGAT TTCGATCTGG
GGCAAAGATG CCGTCCCGCG CAAAGTGCAA CTGAAAGCGT CGCTGATCTC CCACTATCTG
GTGGTGTTCT GTGCCTGGCT GATTCGCTGG CGCAAGCCGG TATTGCTGGT GACCCTGCCG
TTGTTGGCGA TGATGACGGT GTTCACGTTC AAGGTGGATA TCGAAGACTC GGGCATTGCC
TACTTCAAGA AGGACAGCCC GGTGCGGATA TCCGACGCGT TCATCAACCG GGCTGGAGTC
GCCGGTACAT CGCCGGGCTG GATCGCTTTC GACACCAAGA CTCCGCGTGG CGCGCTGACC
ACTGAAACCG TGCAGTTCCT CGAACGTCTG GACCAGTTCA TCAAGGCCCA GCCGAATGTG
AGTTACACCT ATTCGGTGGC GACCTACATC AAGCGCATGA ACCTTGTGCT TAACGACATG
AACCCTGCTT TCCTGCGGGT GCCGCAGGCG GTGGAGCAGG TGACGGTGGT CGATGATGAC
GGCAAACCAG AGACCTTCGA TGTCGATGGC AACTCGCTCA TCGAACAACA CATCATGATG
TTCGAGAACG GTGGCGGCAC TGACTTGCAG AACGTGCTCA ATGCCGATTA CTCGAAGGCT
GTGACGCTGT TCACCATGAC CTCCTCTGTG GCGGGCGATT ACCAGGCGAT GCTCGATAAA
CTGGACGCCT GGCTGGCCAT CAACAAACCG GCGAACCTGC AGGTCACCCA TGCCGGTACG
CCGTACATAT GGACCGGGGT GTTGCAGGAA ATCACCCAGG GTCAGGTGCT GAGCTTCTCG
CTGGCGTTGC TGGCCGTGAC CTTGATGATG ATGTTCTGGC TCAAGTCAGT ACGCCTGGGC
ATCCTCGGCA TGCTGACGTT GCTGACCACG TCGGTGACGG TGTACGGCAG CATGTACCTG
TTGGATATCG AGTTGAACAT CGGTACCACA CTGGTGACGT TCCTGGTGGT GGGCGTTGTG
GATTACGCCG TTCACCTGCT GTCACGGATC AAGATGCTGG TGCAGAAGGG CATCGAGATC
GACGAGGCCA TCCTGGCGGC CATGCAGGGC GTCGGGCGCT CGACGGTGGT CAACGTCGTG
ATCTTCTCGA TGGGCTTTGT CGCGCTGCTG TTCTCCGCCT ACAAACCCGT CATTGACCTG
GGTGTATTGG TGATACTGGC GCTGTCATCC AGCGGCTTCA TGACCATTTT GTTGGTCACG
CTGATTTCGC CGTGGTTCTT TGCCTCGATT GTGCCGCAGC CAGCCGTGCA AGAGGGCGAG
CAGCCGGGGG GTGGGGCTGT GCCAGGCTAA
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| Protein sequence | MERYLNFVER YARAIVFVLV AITAYFTYTL GALMSDTNPY LLKDTHPARK TIIDLQREFT
GTYDSVMVAL NNPESVFNTT SLNAQFELSQ AIRQLMLAND EDRVELQRIV GLHSGDPDAQ
GLLVQILAEG FSQNDYAAAK ALRDHGIARH WDSHDLQFLS FLAERLNPIQ EMASMADLEN
ISLSADGELW IHKTLHALDM DPIKVEAQIM GNEQMVGGVV SADKKVAMVV AELGTKQDDA
QAQLRAYHQV REIIAKYQAA HPEFTDEVFI AGMPIFIAAQ QEIIDHDLAM LFPIVFLLVT
SLLVFFFRKP LGVVLPLFNI LFCTIWTLGL MALLRVPMDL LTSVLPVFLF TICCADAIHV
MAEYYEQLNS GKSFREANRE TQRLMVTPVV LTTVTTIATF LISTTNNIVS IRNFGVFMSI
GLTAALIISL LLIPAWISIW GKDAVPRKVQ LKASLISHYL VVFCAWLIRW RKPVLLVTLP
LLAMMTVFTF KVDIEDSGIA YFKKDSPVRI SDAFINRAGV AGTSPGWIAF DTKTPRGALT
TETVQFLERL DQFIKAQPNV SYTYSVATYI KRMNLVLNDM NPAFLRVPQA VEQVTVVDDD
GKPETFDVDG NSLIEQHIMM FENGGGTDLQ NVLNADYSKA VTLFTMTSSV AGDYQAMLDK
LDAWLAINKP ANLQVTHAGT PYIWTGVLQE ITQGQVLSFS LALLAVTLMM MFWLKSVRLG
ILGMLTLLTT SVTVYGSMYL LDIELNIGTT LVTFLVVGVV DYAVHLLSRI KMLVQKGIEI
DEAILAAMQG VGRSTVVNVV IFSMGFVALL FSAYKPVIDL GVLVILALSS SGFMTILLVT
LISPWFFASI VPQPAVQEGE QPGGGAVPG
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