Gene Pput_2965 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2965 
Symbol 
ID5191991 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3347794 
End bp3350061 
Gene Length2268 bp 
Protein Length755 aa 
Translation table11 
GC content54% 
IMG OID640587411 
Producthypothetical protein 
Protein accessionYP_001268277 
Protein GI148548175 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.909079 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGACG CCCATTTTGA GCTTCTCCTG GCAGACCTCT ACGCTGCACG AGCAGACGAT 
GGTTCAGAGG ACTGGTATGA CACTGCCCGC CGCCTAAATG ACGGGGCCGA TCAGGGGCGC
GATGTCATCC TGCTCGAGGA TGGCCGTCCG GTTGGCGTCA TTCAGTGCAA GCGCTACAAC
GGCATCGTCT CTCTTCCCAT GGTCATTCAG GAAATTTGCA AATTCTTCCT TTATGCGACC
ATTAAGCCTG GCATCGCCTC CGCTCCAGGT GAGCCATTTC GCTATTACGT TGCAGTATCT
GATCGGGCAG CTGGTAAGCT TTTCGAATTC CTGCAAGGGA GCGGCAGGCA ACGTTTCGTA
GACCTTAGAG CAGAATTCGA AGAGAAGGCG CTAGCCGCTC GCAAAGGATC CGCCACCCTT
AGAAAGCATC CTGACCTGAA AGATCTGACA CAGGAGCAGC TGTGTGATTT GGTCTGGGCC
AGGATCGACA ACCTGCAAAC CACCCTGCAC AAGAAAGATG ACCTTTCACG GTTGGTAGGC
GCCTATCCTC GCATCAAGTC GACCTATTTC AAGCTTGAGT CCGATTCGGC ACAGGTCGTT
GGTGAGCTGA AAGCGTTCCT CCAATCACGG AATCTGATGG TGAGTCAGGA GGACGAGGAG
CTCATTTCCG GAATCCGGAC TGAATACATC AAGTTAAAGC TGGGTCGCAA TCAGCGTTTC
AATCTGGGGC TGTTGCAAGG CGTAGAGCTT CTGCCTTTCA TGCGAACCAT GCTCTTGCCC
AAGGCAGGCA CGCTGTTCAA TAACTTTGGC TCGCTTCCCG TGATTTTTAC CGGCGGAGCC
GAGGCGGCAG ATCCGGGCGA CTGGGCAGAA CTTCACCAGC TTGTCGAAAC ATACGATAGC
CAAGCGGTGG TATTCGTAGG TTGCGGTGGC GTGACTGGGG CTCAGCTTGC TGCCTGGAAA
AATTCAGATG ACATGATTTG GATTGATCCA GAGTGGGATC CGGCTCCGCT CCAGAACTAC
AGGGCCGGTT GGTGTTGGGT CAAAGATCCT ACACAGGGTA TTTTCAACTG CTATGTGCTC
GTGGAAAACG AGACAGGCCT GGCTGAGTAC GGGCACGGTA AAGTGTCGCT CCGTCTAGCA
TTTGACGACG TTGTCGTCTG GCCGACCTTG GGTAACGATT TTACGAACCC GATATCCAAT
GCCAGGTCTC AGTTGCGTCG GATAATGGCT AGCCAAAATG AGGACAGTTC GAAGCGGCCT
AATCTTGTCC TCGCATCCAT TAGCGTCACC AGCCTCGAAA AAGTATTGAC CTCGGCCTCA
GATCACTATG GCCAGCGCAT ACACTCGACA ATTGCCACGG CGATTGCCAA CAGTAACCGT
GTCGAAGCGT GTCCTACAGA GCTGTACAGT GCCACTGGCA TCTTTCCAGC GATCGACGTC
GAGTTCGCGA CCCGACCAAC CCCTGCAACC GTTAACCCCT CTGGACGTGT TATGCGTCGG
AGCACCAGTG GTGCTCTTAC ATTCACTCTC GACTGGAATG CAGATGTGAC CCTGGCTGCA
GTAAAGGCGC ATCGCTTGGT TGCGGGGATA GTTACAGACG ATATGCATCC GATGTCGCTT
GAATTTCATG AGCTCTTCAA TCGGTATCCC CCATACCCAG GCTACCTGCC TGCAGTGAAA
GCAGAGCTGG ATCTGCTCGA TACGTTGGTG CAAGGCGCAG GCCTGCCTGA CTACTCGGGT
TTCACCTACA GAACTTGGTT TGGTGTCAAA GCGGGGGAGG ATTTTCCACT GGAGGCGCTC
TGCGCATCTG GTGAAAGCGT TATGAGAACC GTCCAGGCAC TGAGCTATCT CAATGTACCA
CCCGCCAGCC AATGGGTCTG CTCGCCCGAC CTGCAGGGAC ATATCCGGCA TGACGACCCT
GTGCATGGCG AGGTCAACCT TATGGCTTGG GCAAACAGGA ACTATCCCGT CAGACAAATG
GAAGGTGACC TGTTCGACTG GGCTCGACAG CCGATTGTGC ATCCGAGCCT CATCGTCTTC
GCGCAGGGTA GGGGGAACGT CGCGGACAAA AAGCCCAGCG ATGGGCGTTA CGATTACACC
AGTCCGCCTG CCCCCAAGGG ATCAATCACT GAACCCGCGA TTGCAAGAAA CGTTTATATG
TTCAGTTTGG GCGACATTGA ATCGGTGTAT GACGACCCGT CAGCTCCTTC ACCCAATCAG
TTCATGCAAG ATATTTTTGT TCGGAAGGGG AAGTTAGATG CTCAATGA
 
Protein sequence
MGDAHFELLL ADLYAARADD GSEDWYDTAR RLNDGADQGR DVILLEDGRP VGVIQCKRYN 
GIVSLPMVIQ EICKFFLYAT IKPGIASAPG EPFRYYVAVS DRAAGKLFEF LQGSGRQRFV
DLRAEFEEKA LAARKGSATL RKHPDLKDLT QEQLCDLVWA RIDNLQTTLH KKDDLSRLVG
AYPRIKSTYF KLESDSAQVV GELKAFLQSR NLMVSQEDEE LISGIRTEYI KLKLGRNQRF
NLGLLQGVEL LPFMRTMLLP KAGTLFNNFG SLPVIFTGGA EAADPGDWAE LHQLVETYDS
QAVVFVGCGG VTGAQLAAWK NSDDMIWIDP EWDPAPLQNY RAGWCWVKDP TQGIFNCYVL
VENETGLAEY GHGKVSLRLA FDDVVVWPTL GNDFTNPISN ARSQLRRIMA SQNEDSSKRP
NLVLASISVT SLEKVLTSAS DHYGQRIHST IATAIANSNR VEACPTELYS ATGIFPAIDV
EFATRPTPAT VNPSGRVMRR STSGALTFTL DWNADVTLAA VKAHRLVAGI VTDDMHPMSL
EFHELFNRYP PYPGYLPAVK AELDLLDTLV QGAGLPDYSG FTYRTWFGVK AGEDFPLEAL
CASGESVMRT VQALSYLNVP PASQWVCSPD LQGHIRHDDP VHGEVNLMAW ANRNYPVRQM
EGDLFDWARQ PIVHPSLIVF AQGRGNVADK KPSDGRYDYT SPPAPKGSIT EPAIARNVYM
FSLGDIESVY DDPSAPSPNQ FMQDIFVRKG KLDAQ