| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2963 |
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| Symbol | |
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| ID | 5192037 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3344453 |
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| End bp | 3347242 |
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| Gene Length | 2790 bp |
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| Protein Length | 929 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640587409 |
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| Product | DNA repair ATPase-like protein |
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| Protein accession | YP_001268275 |
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| Protein GI | 148548173 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.547311 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAACC TGCCCATCAA ATTCCTTGCC GTTACCATCC AGAATTTTCG GGGCATTCCG
GATGAGTTGG TGGTGCCGTT GGATGCACCT TTAACCGTCA TCCATGCGGC CAACGGCACA
GGTAAAAGCA CCATTTGTTA TGCCTTGGAG TGGTTGGTTA CCGGTAAGGT CGATGATCTG
AACGGGGCAG CACTGGAATG TCAATGGGGT AAGGGTGCTA CTACAGTCTC GGCAAACTGT
TTGATTGACG GAAAGCTTCA CGTACTTACC CGAACCAATA CCTCCCTGTG GATAACCCCC
GACGGCGAGA AAAAGAAAAA AATTAACGAT GAGTTTCTTC TGGGGATGCT CACGCCTACG
TCGGTTTCGG GGAAAAGTAC CATCGCATTG CGAAAGGCCA AGCGTGGATG GTTGCGCAAT
AGTCGGTGGC TTTACTCGAA CTCGCTAGCA TTGTTGATTG ATAATAATAA GGCCGACGAG
CGTCAGCAAA TCTTCGCTGA CATACTTGGT TTTGGTCATC TCACCAGTAC CTTGCGAGAT
CTGCGCGATT ACAGGAAGGC ACTTCCCAAT ACGAAAGGGC TAGCGGACAA AGTTTCGGGC
GTGAAGGCTG AAATTGAAAC GCTCAAAGCC TCCTTGGCCC TTAGTTCTCC GGCCAAGGAG
GCCGCGCTAG ACAACCTTGA AGCTATTTTT ACGGCGTTTC CACCAGCAGT CGAGGGAACC
ATTCCTGAGC GGCTAGAGGC AGCTCAGCTG CGTGTTAACT CGTTCAGCCA GAAGCAACAG
CGAGAAATGG CAGTGCTGAA CACCGTGTAT CAGCAGTGGA CGCCGTACCA CGGTTCTTTG
CAGCAAATTG AAACTCTTCG TCAGTCAGTT GATGCCCTGA CGCAGGAGCA GAAAAAGGCG
AGCGAAGATC ACAGTGTTCG AGCATCAGAA TTGTCCGACG CCCAACAGAA AGTGTCTGAC
GCTCAGCGGT CATTAAAATG GGCTGATGAC AGCCTGCTAA CCTTCCATGG GTGGCAAACA
GCTACTAGCG CTCAGGGTGT GGGAGGGTAT TTTGAGCAGA TTGACCGAAG CCAAGCGGAA
CTTGAGGCGG CGGGTTTTGT AGAGCTGGGA TGGAGTTCTG ATCGGCAAAC GGAGTGGAAA
AAGGCAATTG CTCTTCTGTC CGCTAACTTC CAAAAAATTA TGGAGCTTGA GCGTCAGAAA
AGTGACCTGA AGGCGAATCC TGTAGCGCCT GCTATCGACT TCGACGAAAA GGCACGCCTG
GCTGATGCGG CAAAGAATAT ACGCATTCGA GCAGAAGCAG ACTTTGACGC ATATACTAAC
GTTTTGGGTA AGTTAAAGGT TATGGGCAGT GAGTTCGCTC ATGCTCATGA TGACCCTCAC
TGTCCGCTCT GTAATTATAA TTGGCCCACC ACTGCTAGGC TTCGGGAAGA AATATCCTCG
AATATGGAAG TGCTTGCACC GGCTCTTGAA GCTGCCTCAA GTGCACTGAC GTTGGCTCGT
AAAGATGAGC AGGACGCCAT TAAAGCCCTG GAGTTAGCTA CGTCGCAGAA ATCGGCGTAT
GAAACTTATT TGGCTCGATC TAATTCCGTG TATCAAGAGC TGCAGTCGTT TGCAATCAGG
AGTACGTACT TCGAAACGAT GAATGTTCAA GACTTCTCCG GAATGAACAT GGACGGCCTT
GCTAATATGA ATCGCAGGGT AACCTCTGCA ATTCAAATCA GCGGAATTTT TGAAAAGCTT
TCCGAAGTAG AGAAGTTTTT CGCCATTACT CCGGCGAGCG GTGCGGCAAC ACGGGTATCG
AGCGCCGTCG CAAGCTTGGG AAGCTACAAG AAACATTTTC AGGATCAATT CGACCAATAC
GAGCCGGCGA GAGCTCGCCT CGTTCTGGCT GTACAAGGAC TTTTACAGGC CGTTCAGTCC
AAGGCAGGCG AGATCGCTGG TCTCAACGCG AACATCGCTG CGGCGGTAGA GATCTCCAGC
AGCTTCGATT CCCATTGGCG TGAGCTTTTT GGTGATCAAC CCGTGTCAGT AGAGTCCTAC
GACATCATGC GTCAGCAGCT GGGTCAGCGA GGAATTGATG CAACGACATA CACCAGCATG
CTTGATCAAT GCAAAGCTGT GGTGAGCGTT GATGCCGACT CGGCGAAGTT GAAAAAGCTG
GAGCAGGAAC TGGTTCAATT GACCAGCAAG CTCAGAATCG GCACAGGCTA TATTGCTGAT
GCAGACCTGG CGATTGAGCA GTATGCCTTG CATGTAAAGG ACTTCACTGC CTCTAGCCTG
AAGCCCCTGT TGAGTCCTGC AGCTGAGCTG TTTTCCAGGA TGCATGCCAA CGAGGTCTAC
AAGGGGCTGG GCGTTTCAGA AGGCGAAGAC GCATTGAAAT GGACAGTCTT CGCCGAGGGC
CATGAGCCTG CATTGGACGC AGAAGGGAAG CTTAGCCAAG GCCAGCGCCA GGATCTGGCA
TTGTCGCTAT ACCTAGCCAG GGCTCGGAAT ACCGGGGGAA GCTTCTTCCT CGATGAGCCA
ATCGCGCATT TGGATGACCT GAATCGCGTG GCAATGCTGG ACATTTTCCG GCTGGTGGCC
ACCTCGATGC CGGATATGAA CTTGATCTTG ACCACTGCCA GTGATTCGCT GGCCCGGCAC
ATGGCTCAGA AGTTTTCGAG CATCACCGAC CGGCACCTGT TGAACATGAT TCATTTGGAG
GGGAACCCCC GCACCGGAGT TAAAATGACA GTTCAGGGCA ATGCGGCGGT GCCAAATAAC
CCCGGTCAAA CCGAGAGCTT GAGGGAGTAG
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| Protein sequence | MNNLPIKFLA VTIQNFRGIP DELVVPLDAP LTVIHAANGT GKSTICYALE WLVTGKVDDL
NGAALECQWG KGATTVSANC LIDGKLHVLT RTNTSLWITP DGEKKKKIND EFLLGMLTPT
SVSGKSTIAL RKAKRGWLRN SRWLYSNSLA LLIDNNKADE RQQIFADILG FGHLTSTLRD
LRDYRKALPN TKGLADKVSG VKAEIETLKA SLALSSPAKE AALDNLEAIF TAFPPAVEGT
IPERLEAAQL RVNSFSQKQQ REMAVLNTVY QQWTPYHGSL QQIETLRQSV DALTQEQKKA
SEDHSVRASE LSDAQQKVSD AQRSLKWADD SLLTFHGWQT ATSAQGVGGY FEQIDRSQAE
LEAAGFVELG WSSDRQTEWK KAIALLSANF QKIMELERQK SDLKANPVAP AIDFDEKARL
ADAAKNIRIR AEADFDAYTN VLGKLKVMGS EFAHAHDDPH CPLCNYNWPT TARLREEISS
NMEVLAPALE AASSALTLAR KDEQDAIKAL ELATSQKSAY ETYLARSNSV YQELQSFAIR
STYFETMNVQ DFSGMNMDGL ANMNRRVTSA IQISGIFEKL SEVEKFFAIT PASGAATRVS
SAVASLGSYK KHFQDQFDQY EPARARLVLA VQGLLQAVQS KAGEIAGLNA NIAAAVEISS
SFDSHWRELF GDQPVSVESY DIMRQQLGQR GIDATTYTSM LDQCKAVVSV DADSAKLKKL
EQELVQLTSK LRIGTGYIAD ADLAIEQYAL HVKDFTASSL KPLLSPAAEL FSRMHANEVY
KGLGVSEGED ALKWTVFAEG HEPALDAEGK LSQGQRQDLA LSLYLARARN TGGSFFLDEP
IAHLDDLNRV AMLDIFRLVA TSMPDMNLIL TTASDSLARH MAQKFSSITD RHLLNMIHLE
GNPRTGVKMT VQGNAAVPNN PGQTESLRE
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