Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pput_2959 |
Symbol | |
ID | 5190332 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida F1 |
Kingdom | Bacteria |
Replicon accession | NC_009512 |
Strand | + |
Start bp | 3340719 |
End bp | 3341657 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640587405 |
Product | hypothetical protein |
Protein accession | YP_001268271 |
Protein GI | 148548169 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4227] Antirestriction protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.409787 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.940796 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGATG TCTATCTGGA TGTCACCAAC AAGATCGTCA GCGCCTTGAG CCAAGGCGTG ATTCCCTGGA TCAAACCCTG GACCACCACC GGTTCCAGTG CTGACTCCCC TTTTCCCATC AACGCCATCA CCCGGCGGCC CTACGCCGGG ATCAACATTC CACTGCTGTG GGCCGAGGCG CGCCTGCGAG GTTTCACCCA GGATCGCTGG CTGACCTTCA ACCAGGCACG CAAAGCTGGT GGCCATGTAC GCAAGGGGGA GCAATCCACC CTCGCGGTGC TGTACAAACC GATGAGCAAG GAGGCGCACG ACGAGGACGG TCAGGTCGTT CGCGATGACC AGGGCAATAT CAAGATGGTG CAATTCGCCC TCTTGCGCAC GCACTGCCTG TTCAACATCG AGCAGACCGA AGGTCTGCCT GACGAGGAGC CAGGCCTCAC TGAACACACC GAGCCGCTCG CATTTATCGA CCATGCCCCA GCCGAGCAGT TGCTGCTAGC CAGTGGCGCA CAGATCGAAC ATTGCTACGG CGACAGCGCA TTCTATCAAC CCCTGCGTGA TCGCATCCAG CTGCCAACCA AGGCCCAGTT CGAAGACGTC GGCAGCTACT ATGCGACGGC CCTGCATGAG CTGACTCACT GGTCGGGTCA TCGATCGCGC CTGAACCGCG ATGGCATCAC CGGCGGGCAC GCGTTTGGCT CCGCAGCCTA TGCCTTCGAG GAACTGGTTG CAGAGATGGG GGCAGCGTTT CTCTGCGCGC TGACCGCCAC CCAGGGAGAG TTACGCCACG AGGAGTACCT GGCCTCCTGG CTGAAGATCC TCAAGGAAGA CAAGCGTGCG ATCTTCCGCG CCAGTGGCCA GGCCCGTGAG GCCTCGGAGT TCCTGCTGGC ACTGCAGGCC GAGCGCACCA CAGAAGCGCC GGAGCGACTC ACGGCGTAA
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Protein sequence | MSDVYLDVTN KIVSALSQGV IPWIKPWTTT GSSADSPFPI NAITRRPYAG INIPLLWAEA RLRGFTQDRW LTFNQARKAG GHVRKGEQST LAVLYKPMSK EAHDEDGQVV RDDQGNIKMV QFALLRTHCL FNIEQTEGLP DEEPGLTEHT EPLAFIDHAP AEQLLLASGA QIEHCYGDSA FYQPLRDRIQ LPTKAQFEDV GSYYATALHE LTHWSGHRSR LNRDGITGGH AFGSAAYAFE ELVAEMGAAF LCALTATQGE LRHEEYLASW LKILKEDKRA IFRASGQARE ASEFLLALQA ERTTEAPERL TA
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