Gene Pput_2959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2959 
Symbol 
ID5190332 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3340719 
End bp3341657 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content62% 
IMG OID640587405 
Producthypothetical protein 
Protein accessionYP_001268271 
Protein GI148548169 
COG category[L] Replication, recombination and repair 
COG ID[COG4227] Antirestriction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.409787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.940796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAGATG TCTATCTGGA TGTCACCAAC AAGATCGTCA GCGCCTTGAG CCAAGGCGTG 
ATTCCCTGGA TCAAACCCTG GACCACCACC GGTTCCAGTG CTGACTCCCC TTTTCCCATC
AACGCCATCA CCCGGCGGCC CTACGCCGGG ATCAACATTC CACTGCTGTG GGCCGAGGCG
CGCCTGCGAG GTTTCACCCA GGATCGCTGG CTGACCTTCA ACCAGGCACG CAAAGCTGGT
GGCCATGTAC GCAAGGGGGA GCAATCCACC CTCGCGGTGC TGTACAAACC GATGAGCAAG
GAGGCGCACG ACGAGGACGG TCAGGTCGTT CGCGATGACC AGGGCAATAT CAAGATGGTG
CAATTCGCCC TCTTGCGCAC GCACTGCCTG TTCAACATCG AGCAGACCGA AGGTCTGCCT
GACGAGGAGC CAGGCCTCAC TGAACACACC GAGCCGCTCG CATTTATCGA CCATGCCCCA
GCCGAGCAGT TGCTGCTAGC CAGTGGCGCA CAGATCGAAC ATTGCTACGG CGACAGCGCA
TTCTATCAAC CCCTGCGTGA TCGCATCCAG CTGCCAACCA AGGCCCAGTT CGAAGACGTC
GGCAGCTACT ATGCGACGGC CCTGCATGAG CTGACTCACT GGTCGGGTCA TCGATCGCGC
CTGAACCGCG ATGGCATCAC CGGCGGGCAC GCGTTTGGCT CCGCAGCCTA TGCCTTCGAG
GAACTGGTTG CAGAGATGGG GGCAGCGTTT CTCTGCGCGC TGACCGCCAC CCAGGGAGAG
TTACGCCACG AGGAGTACCT GGCCTCCTGG CTGAAGATCC TCAAGGAAGA CAAGCGTGCG
ATCTTCCGCG CCAGTGGCCA GGCCCGTGAG GCCTCGGAGT TCCTGCTGGC ACTGCAGGCC
GAGCGCACCA CAGAAGCGCC GGAGCGACTC ACGGCGTAA
 
Protein sequence
MSDVYLDVTN KIVSALSQGV IPWIKPWTTT GSSADSPFPI NAITRRPYAG INIPLLWAEA 
RLRGFTQDRW LTFNQARKAG GHVRKGEQST LAVLYKPMSK EAHDEDGQVV RDDQGNIKMV
QFALLRTHCL FNIEQTEGLP DEEPGLTEHT EPLAFIDHAP AEQLLLASGA QIEHCYGDSA
FYQPLRDRIQ LPTKAQFEDV GSYYATALHE LTHWSGHRSR LNRDGITGGH AFGSAAYAFE
ELVAEMGAAF LCALTATQGE LRHEEYLASW LKILKEDKRA IFRASGQARE ASEFLLALQA
ERTTEAPERL TA