Gene Pput_2956 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2956 
Symbol 
ID5190476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3337277 
End bp3338815 
Gene Length1539 bp 
Protein Length512 aa 
Translation table11 
GC content60% 
IMG OID640587402 
Producthypothetical protein 
Protein accessionYP_001268268 
Protein GI148548166 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACATGA GCACCAACAG CTACCTTGAG TACTACCTGT CGCTGCTGGC CTGGATCATC 
AACAACGGCA TCTGGAATAC GCTGGTGGAT ACCGGGCTGT TCGCCGCTCC CTTCGGTGCG
GTCATCCTGC AGGAATGGCT GTCGGCCCGC CAACAGGGTG CTGACGAAGG CAACAAGGGC
CTACTGTCGA TCCCTCGCGT CGAGAACCGG CTGTGGATGA GCTACGTGGT CATTATGTTC
GGCTGCATGC CGTTCTTCCC GCTGAACCTG TCCTCCGTGA CGTTTGACGA TGCCGCGAGC
CAGCGCTGTG GGGTCACAAT GGCCAGGCCC GCCGACACGG CCTGGGCCAC GACTTTCAAC
ACCATCGGCG AGAAGTCAGC GAACGTGCCG GTGTGGTGGT TCCTAGTGCA TGCCATGAGC
AAAGGCATCA CCGCCGCTGC CACCGCGGCG ATTCCCTGCG CGCCCGACAT CCGGGCGATG
CGCATGGAGA TCGATAGTTC GCGGATCAAC GACCAGGTGC TGCTACAGGA AGTCGCCGAC
TTCACCCGGG ACTGCTACGG TTTTTCGCGC TCGCGGCTGT TCACCAATCG CCCCGAGCTG
GACGAGTCGC AGAGCTACGA CGCGTCCTGG ATTGGCTCGA CTTACCTACT CAACACACCG
GGCTACTACG ATACCGATCG CTCGCGAATG CCCAGAGTCG ATTGGCCGTA CGACGAGACC
CGGGACACCT CTCTGCCTCA GCTCGACAGC GGCGCCGGCT ACCCCACCTG CAAACAGTGG
TGGAGCGACG GCACGATCGG ACTGCGCGAC CGCTTGGTGG CCGCTGTTGA TCCTTCATTG
CTATCGCAGC TGCGGGGCTG GCTCACCGGG CGCACCTCTA CGGAGGTCGA AGACGCCACC
TTGCGCGAGC TGGTGAGCCC ACGGCAGCAA TCATTGAGCA TGGCACCTGG GCAGGTGTTC
CAGGACTATG GCAGTAGCGC GAGGGGCGGA TCGCTGACGC AAGGGCTAAA CAACCTGGCC
ACCAATACCG GTTTGGCCCT AGGCTCGTTC AGTAACTTCC CGGCGATGAA TGCGCTGCGC
GCGGCCTTGC CGATGATCCA AGCCTTTCTG ATCATGGGCA CGATCATCAG TCTGCCACTG
GTGCTGCTGA TCAGCACCTA CCAGCTCAAG GCGCTCATGA CGATCACATT CGCGCTGTTC
ACCCTGCACA TGCTCACCTT CTGGTGGGAG CTCGCACGCT GGATCGACTC AAGCATGCTG
GAAACGCTGT ACAATCAGGT ATCGGTCTCA GACCAGGCGC TGTTGTCGTT GCCGACAGCA
GGCTTCATGG ACGGAACGGT CACCGCGCAG GTGATCGAGT ACGTCATGGG CGCAATGTTT
GTTTTGCTAC CCATGATCTT TATCGGTGCA ATGAGTTGGG CGGGATACAA CGTGGGAAGT
GCTATCCAGA CCCTTCTTAC TCGTGGAACA GAGGCCGCTC AGACACAAGC AGGAAGAGGC
TCATCACAGC TAATGACAGG TGTCCAGAAA CTCAAATAA
 
Protein sequence
MNMSTNSYLE YYLSLLAWII NNGIWNTLVD TGLFAAPFGA VILQEWLSAR QQGADEGNKG 
LLSIPRVENR LWMSYVVIMF GCMPFFPLNL SSVTFDDAAS QRCGVTMARP ADTAWATTFN
TIGEKSANVP VWWFLVHAMS KGITAAATAA IPCAPDIRAM RMEIDSSRIN DQVLLQEVAD
FTRDCYGFSR SRLFTNRPEL DESQSYDASW IGSTYLLNTP GYYDTDRSRM PRVDWPYDET
RDTSLPQLDS GAGYPTCKQW WSDGTIGLRD RLVAAVDPSL LSQLRGWLTG RTSTEVEDAT
LRELVSPRQQ SLSMAPGQVF QDYGSSARGG SLTQGLNNLA TNTGLALGSF SNFPAMNALR
AALPMIQAFL IMGTIISLPL VLLISTYQLK ALMTITFALF TLHMLTFWWE LARWIDSSML
ETLYNQVSVS DQALLSLPTA GFMDGTVTAQ VIEYVMGAMF VLLPMIFIGA MSWAGYNVGS
AIQTLLTRGT EAAQTQAGRG SSQLMTGVQK LK