Gene Pput_2951 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2951 
Symbol 
ID5193030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3332726 
End bp3333202 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content57% 
IMG OID640587397 
Productputative prophage repressor 
Protein accessionYP_001268263 
Protein GI148548161 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATATC TACTGTATAT GCATACAGTT TGCATTGGAC CTTCCATCAT GACCATCACA 
TTCTTGGGCG TGCCCACCGG CGGCACTGAA CCCTTACCCC TGTATTCGTT TCACGTCCCT
GCCGGCTTCC CGTCGCCTGC AGCGGATCAC CTGGAAAGCC ATATTTCCCT CGATGAGCTA
TTCGACCTCC GCGCGCCGCA TGTGTATCTG GTGAAAGTGG AGGGCGATAG CATGCAGGGC
GCCGGTATCT ATTCCGGGGA TATCGTCATC GTAGACCGGG GGCGAGAAGC GGAGCACGGC
GATATCGTCA TTGCGGCCGT CAACAGCGAA CCGGTATGCA AACGGCTTCA CCGTCGTGAC
GGGGTGGTAA TCCTCAAGTC GGAAAACACA GCGTATCCCC CACGCTACAT CATGGAAGGT
GACGACCTGG TCGTTTGGGG TGTGGTCCGG TACAGCGTCC GTGATCATGC GCAGTGA
 
Protein sequence
MPYLLYMHTV CIGPSIMTIT FLGVPTGGTE PLPLYSFHVP AGFPSPAADH LESHISLDEL 
FDLRAPHVYL VKVEGDSMQG AGIYSGDIVI VDRGREAEHG DIVIAAVNSE PVCKRLHRRD
GVVILKSENT AYPPRYIMEG DDLVVWGVVR YSVRDHAQ