Gene Pput_2950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2950 
Symbol 
ID5192414 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3331462 
End bp3332736 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content59% 
IMG OID640587396 
ProductDNA-directed DNA polymerase 
Protein accessionYP_001268262 
Protein GI148548160 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGTG ACCCGGTGTT CGCGCTCATT GATTGCAACA GCTTTTACGC AAGCTGTGAG 
CGCGTGTTCC GGCCGGATCT GGCCAAAACG CCGATTGTCG TACTGAGCAA CAACGACGGC
TGTGTGATCG CCAGGTCTTA CGACGCTAAG CCCTACGTGA AGATGGGGGA GCCTTATTTT
CAGGCGAAGG ACAAGCTCAG TCGGCATGGC GTCGTGGCGT TCAGCAGCAA CTACGCCTTG
TACGGCGACA TGAGCGAACG GGTTATGACG CTGATCGAAT CAATGGTGCC GGCGACTGAG
GTCTATAGCA TCGATGAATG CTTCGCTGAC CTCTCCGGCA TTCCTGAAAA CCTAACCGAG
TTCGGGCGCA AGGTTCGATC GAGAATTTTC CAGTGCACGG GCATCCCGGT CGGTGTAGGT
ATCGCCAGCA CAAAGACGCT CGCCAAGCTG GCTAACCATA CGGCTAAACG CCTCCAGGCG
CAGACCGGCG GAGTGGTGGA CATCACTGTT CCGTTCAAGC GCGATTGGGT GCTGCGCAAT
ACCGAGGTGA AAGAGGTGTG GGGCATTGGC CGGCGGATGA CGGCTCACCT CGAGGCGATG
GGCATCCGGA CGGCCATGGA CTTGGCCAAG GCCGACGCTT GGACACTTCG GCAGAAGTTC
AGCGTCGTGG TGGAAAAGAC TGCCCGCGAG CTGGCCGGCA CGCCCTGCCT TGAACTTGAT
GAGGTCGAAC CGCCTAAACA AGAGATCTGC TGCAGCCGGA TGTTTGGCAA GCGGCTAACC
GAGCTGGCGC CAATTAAGCA AGCCGTGGCC ACCTACGTCG GGCGAGCGGC GGAGAAGCTC
CGCTCCCAAG GTTCGGTATG CAAGCGCATG CGCGTGAGCA TCCGCACGGG GATGTTCAAT
CCGGACGAGG CCCACCACGC CCAGGGCGCT CTGGTGGAGC TGCCGTACCC AACCTGCGAC
ACGCTATTGA TGACCAGATT GGCCACCGAC GCAGTCGCGC GGGTCTTTCG GCAAGGGTTC
CGGTACAGCA AAGCAGAGGT CCTGCTGATG GATCTGCGGC AGCCCGGCGA GTTTTCAGAG
GATTTGTTTG CGCTCAAGCA GTCAGTTGCA TGTGACCGGT TGATGCAGGT GATGGACGAC
ATCAACGAGC GCTGGGGAAG GGGAACGATG CGCGCCGGTA GTGTACCGGT GGCGCCAGAG
TGGGGGATGA GAAGGGAAAT GATGAGCCAA TCCTTTACGA CCAGGATCGA TCAGTTGTGG
ACGGTCAAAT GCTGA
 
Protein sequence
MRSDPVFALI DCNSFYASCE RVFRPDLAKT PIVVLSNNDG CVIARSYDAK PYVKMGEPYF 
QAKDKLSRHG VVAFSSNYAL YGDMSERVMT LIESMVPATE VYSIDECFAD LSGIPENLTE
FGRKVRSRIF QCTGIPVGVG IASTKTLAKL ANHTAKRLQA QTGGVVDITV PFKRDWVLRN
TEVKEVWGIG RRMTAHLEAM GIRTAMDLAK ADAWTLRQKF SVVVEKTARE LAGTPCLELD
EVEPPKQEIC CSRMFGKRLT ELAPIKQAVA TYVGRAAEKL RSQGSVCKRM RVSIRTGMFN
PDEAHHAQGA LVELPYPTCD TLLMTRLATD AVARVFRQGF RYSKAEVLLM DLRQPGEFSE
DLFALKQSVA CDRLMQVMDD INERWGRGTM RAGSVPVAPE WGMRREMMSQ SFTTRIDQLW
TVKC