Gene Pput_2939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPput_2939 
Symbol 
ID5193203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida F1 
KingdomBacteria 
Replicon accessionNC_009512 
Strand
Start bp3323046 
End bp3323438 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content56% 
IMG OID640587385 
ProductNUDIX hydrolase 
Protein accessionYP_001268251 
Protein GI148548149 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGACA GGAACATAAG AAAGTTAAAA GCGAGAGCCA CAATCATCTG TCTGCACAGC 
GGCAAGGTGC TGCTGGTGCG CAAGAAAGGG GGAAAGTGGA ATTTCCCAGG CGGGGCGATC
GAGGCGGGCG AAACTCCACT TGCCGCTGCG GCGCGAGAGC TTCGGGAAGA AACGAGCATC
AACGGCCATG GCTTACTTTA CTTGTCCACC ATCACCGTGG AATCAACCAT CCACCACATT
TTCATCACCC ACTTTCACGA CGGCGACAAG GTCGTAGCCT GCAATGAGAT CGCGGCCTGT
AAATGGTTGC CGCGCGACAA GCTGACCCCT TCCATTCTCA AGGCCACGGC AGCAGGCTTG
ATAGCGACTC AGCTGCCAGC CTTGATCGCT TAG
 
Protein sequence
MPDRNIRKLK ARATIICLHS GKVLLVRKKG GKWNFPGGAI EAGETPLAAA ARELREETSI 
NGHGLLYLST ITVESTIHHI FITHFHDGDK VVACNEIAAC KWLPRDKLTP SILKATAAGL
IATQLPALIA