| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2934 |
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| Symbol | |
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| ID | 5193820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | + |
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| Start bp | 3317579 |
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| End bp | 3319705 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640587380 |
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| Product | hypothetical protein |
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| Protein accession | YP_001268246 |
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| Protein GI | 148548144 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCGAAC ATGCGATGGA GTCCCTGCTG CGCCCTGCGG TGGAGCTGTA CACCGTGGGC
ATCTGCGCCG GTGCCGGCGC CCTGTGTCTG CACTCACCTT GGGCGGTGGC GCTATCGCCA
GAGGTGGGGG CAGGCATGGC CCTGGCCTAT ACCGCATTCG GCCTGAAGCG GCTCAACGAG
GCACGGATCG TCCTGCGCTA TCGGCGCAAT ATCCGCCGCC TGCCGCGCTA CTCGCTGACC
AGCCGACAGA TTCCGGTGAG CGGCAAGCGC CTGTTCATGG GCCGTGGCTT TCGCTGGACC
CGCCTGCACA CCCAGCGTCT GCTCGAGGCG CAGGACCCGG CGTTGGCCCG CTACGTCAAT
CAGTCGGCCG CCCACCAGTG GGCGCGACGG ATGGAACATC TGCTGGAGAA GGCCCCGCCA
GGGTTGTCGC TGTTGCCCCG CCTGACCGCC TGGGACAGCC CATTTAACCC GGTACGGCCC
CTGCCGCCGG TGGGCGGCTC GCCACTGCTG CACGGCGTCG AACCAAAGGA ACAGGAAGCC
AGCTTGCCGC TGGGCGAGCG CGTCGGCCAC ACCCTGGTGC TGGGCACCAC GCGAGTCGGC
AAGACACGCT TGGCCGAGGT GTACATCACC CAGGACATAC ACCGACCCAG CCAGGAAGTG
GTGATCGTCT TCGACCCCAA GGGCGATGCC GACCTGCTCA AGCGTATGTA CGTGGAAGCG
CGGCGCGCCG GCCGTGAGCA TGAATTCTAT GTGTTCCACC TGGGCTGGCC GGAGATCTCC
GCGCGCTACA ACGCCATCGG CCGCTTCGGC CGCATCTCCG AAGTCGCCTC CCGCATCGCT
GGCCAACTGA GCGGCGAAGG CAATTCGGCC GCATTTCGCG AGTTCGCTTG GCGCTTTGTC
AACATCATCG CCCGGGCCCT GATCGAGCTC GGCCGGCGCC CCGACTACCT GCAAATCCAG
CGGCATGTGG TGAACATCGA TGCGCTGTTC ATCGAGTACG CCCAGCACTT CTTCGCCCGC
CATGATCCTC AGGCCTGGGA AGCGATCGTG CAAATCGAAG GCCGGCTGAA CGAGAAGAAC
ATCCCGCGCC ACATGGTTGG CCGGGAAAAG CGCGTGGTCG CCATCGAGCA GTACCTGAGC
GCCAAGCGCA TCTTCGATCC GGTGATGGAC GGCCTTCGCT CAGCCGTACG CTACGACCGT
ACCTACTTCG ACAAGATCGT GGCTTCACTG CTGCCACTCC TGGAAAAACT CACCAGCGGC
AAGACCGCAC AACTGCTCGC CCCCAACTAC ACCGACCTCG ACGATCCACG GCCGATCTTC
GACTGGCTGC AGGTCATCCG CAAACGCGGC ATCGTCTACG TCGGCCTGGA TGCGCTGTGC
GATGCTGAGG TCGCCGCCGC TGTCGGTAAC TCGATGTTTG CCGACCTGGT CTCCGTCGCT
GGCCATATCT ACAAACACGG TATCGATCAT GGCCTGCCAG GCTCCTCCAG CGCCGCGGAC
AAGGTGCCGA TCAACCTGCA CGCCGACGAG TTCAACGAAC TGATGGGCGA CGAGTTCATT
CCACTGATCA ACAAGGGTGG TGGCGCCGGT ATCCAGGTCA CCGCCTACAC CCAGACCTTG
AGCGACATTG AAGCGCGTAT CGGCAACCGG GCCAAGGCCG GCCAGGTCAT CGGCAACTTC
AACACCCTGC AGATGCTACG GGTACGGGAG ACCGCCACCG CCGAACTGCT GACCAACCAA
CTGCCCAAGG TCAACGTACA GACCCGCACC CTGGTCTCTG GCGCGACGGA CACCGCCGAT
CCGGATGCCC GAACCGACTT CACCTCCTCC TCGCAGGATC GGGTTACCAC CACTTCGGTA
CCGCTGATCG AGCCGGCGCA CATTATCGCC TTGCCCAAGG GACAGATGTT CTCGTTCCAG
GAAGGCGGAC AATTGTGGAA GGTGCGCATG CCGCTACCGA AGCCGGCCAG CGACGACGCA
ATGCCGGCAG ACCTGCAGAC CCTAGCAGAG CGCATGCGCG ATTCCTACAA CGCCAATGCG
GGGAGTTGGT GGAGCACCAC CGGCGGCGCT CCGACGGTCG ATTTCGATCC AGAGCAGCCT
CCACCCGGGC GCAGACACAC ACCGTAA
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| Protein sequence | MGEHAMESLL RPAVELYTVG ICAGAGALCL HSPWAVALSP EVGAGMALAY TAFGLKRLNE
ARIVLRYRRN IRRLPRYSLT SRQIPVSGKR LFMGRGFRWT RLHTQRLLEA QDPALARYVN
QSAAHQWARR MEHLLEKAPP GLSLLPRLTA WDSPFNPVRP LPPVGGSPLL HGVEPKEQEA
SLPLGERVGH TLVLGTTRVG KTRLAEVYIT QDIHRPSQEV VIVFDPKGDA DLLKRMYVEA
RRAGREHEFY VFHLGWPEIS ARYNAIGRFG RISEVASRIA GQLSGEGNSA AFREFAWRFV
NIIARALIEL GRRPDYLQIQ RHVVNIDALF IEYAQHFFAR HDPQAWEAIV QIEGRLNEKN
IPRHMVGREK RVVAIEQYLS AKRIFDPVMD GLRSAVRYDR TYFDKIVASL LPLLEKLTSG
KTAQLLAPNY TDLDDPRPIF DWLQVIRKRG IVYVGLDALC DAEVAAAVGN SMFADLVSVA
GHIYKHGIDH GLPGSSSAAD KVPINLHADE FNELMGDEFI PLINKGGGAG IQVTAYTQTL
SDIEARIGNR AKAGQVIGNF NTLQMLRVRE TATAELLTNQ LPKVNVQTRT LVSGATDTAD
PDARTDFTSS SQDRVTTTSV PLIEPAHIIA LPKGQMFSFQ EGGQLWKVRM PLPKPASDDA
MPADLQTLAE RMRDSYNANA GSWWSTTGGA PTVDFDPEQP PPGRRHTP
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