| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2900 |
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| Symbol | prpE |
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| ID | 5194669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida F1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009512 |
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| Strand | - |
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| Start bp | 3289375 |
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| End bp | 3291324 |
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| Gene Length | 1950 bp |
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| Protein Length | 649 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640587348 |
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| Product | propionyl-CoA synthetase |
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| Protein accession | YP_001268214 |
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| Protein GI | 148548112 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02316] propionate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.915781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.677321 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATT CGAGTGGATT GATCCGTCCG GACGGAGCAA AGAAGGAGGA TCGCTATCTT
AATCTCTATC GTCATTCCGT GGACGATCCT GAGAGTTTCT GGGCCGAACA AGCGCAGCGC
ATCCATTGGC ACGTTCAGCC GCAGAGAATC CTTGAGGCGT CGAACCCACC CTTCCGACAA
TGGTTTGTTG GTGGTCAGAC CAACCTCTGC TTCAACGCCC TCGATCGCCA CTTGCCAGAG
CGTGCCGAAC AGTTGGCGTT GGTAGCTGTT TCCTCGGAAA CAGGAGTTAC CCAGGAGATC
ACCTATGCGC AGCTGTATCG GGAAGTTAAT ACCTTCGCCG CAGTACTCAA GCGACTCAAC
GTAGAAAAGG GTGACCGAGT CGTCATCTAC ATGCCGAACA TGGCTGAGGC AGTTTTCGCC
ATGCTTGCTT GTGCGAGGAT CGGGGCGATC CACTCCGTAG TCTTTGGCGG CTTCGCTGCG
CGTAACTTAT CGGCGCGCAT CGACGACTCG CAGCCTAAGT TGCTGATTAC TGCCGATGCA
GGGATGCGCG GTGGCCGGGT CATTCCGTAC AAACCACTGG TGGACCAAGC CTGTGCGGAG
TCGGAGTCAC CGCCACCCAA GGTGCTGATA GTGTCTCGTG GTTTGCAGCC AGAGCTGACC
TGGGTACCGG GGCGTGACGA AGACTACGCG ACTTTGCGCG CCGCTGTTGG TGATGCGCAG
GTGTCAGTGG AGTGGCTGGA GTCGAACGAT CCCAGCTACC TGCTTTACAC ATCGGGCACT
ACCGGAAAAC CCAAGGGGGT ACAACGCGAT GTCGGTGGCT ATGCGGTTGC CCTGGCGCTG
TCAATGGAGA CGGTTTTTGA CGTTGCTCCT GGGCAGGTGA TGTTCTCGAC CTCGGATGTC
GGTTGGGCGG TCGGGCATTC TTACAATGTC TATGGGCCGC TAATCGTCGG TGCGACTTCG
TTGTTGTATG AGGGCTTGCC TACCCATCCG GATGCCGGCA TCTGGTGGTC GCTATGTGAA
AGGTATGCCG TGCGTACCAT GTTTTCCTCA CCGACGGCCG TCCGTGTGTT GAAGAGGTTC
AATACCGACG CCATTGCTCG GCACGACTTG AATGCCTTGC GCTACCTCTT CCTGGCCGGG
GAACCCCTGG ACGAGCCGAC AGCTAACTGG ATCAGTCGGG CACTCGGCAA GCCAGTCATC
GACAACTACT GGCAGACCGA GACTGGCTGG CCGGCGATTA CCCTTCATCC TGGCTTGGAA
ATGAAACCTG TGAAGTTAGG CTCGGCTGGC CTGCCGAATT TGGGCTACAG GATCAAGGTG
ATTGATGAGC TCAGCGGGGC GCCTGTCGCG GCGCATCAAA AAGGCATGCT TGTCGTTGAG
CCGCCGTTAC CACCGGGCTT CATGACGACG ATCTGGCGTG ATGATGATCG CTTCTGTAGT
AGCTACTTTG GGCACTTCAA GGAGCAGGTC TACAGCTCGC TTGATTGGGC GGTCCAGGAT
GAGGACGGTT ACACCTACAT TCTTGGGCGT ACCGATGATG TCATCAACGT TGCTGGGCAT
CGTCTGGGGA CTCGCGAAAT CGAGGAGTCC GCTGCGGAAG CTTCCCGCGT TGCCGAGGCG
GCAGTTATCG GTGTCCCCGA CGAGATCAAG GGGCAGGTAC CAGTTGCCTT TGTCACGCTC
CGTAAGACTG CTTCCGATGA ACTCCAGCGC CGAGAGGCTG CGGCAGAGAT ACGCCAGGCG
GTAGAGAGCC GTCTGGGGGC GGTGGCGCGA CCTGCTCGGG TGTATATCGT CAATCTCCTG
CCGAAAACGC GTTCAGGCAA ATTACTTCGT CGGTCATTGC AAGCCCTGGC GCTGCAGGCG
GATCCAGGGG ACTTGTCCAC CCTTGACGAC CCTAGTGCAC TCGATGAGAT TCGCCATGCC
CTGAGACGTG GACCGGACGC GGGGAACTGA
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| Protein sequence | MSYSSGLIRP DGAKKEDRYL NLYRHSVDDP ESFWAEQAQR IHWHVQPQRI LEASNPPFRQ
WFVGGQTNLC FNALDRHLPE RAEQLALVAV SSETGVTQEI TYAQLYREVN TFAAVLKRLN
VEKGDRVVIY MPNMAEAVFA MLACARIGAI HSVVFGGFAA RNLSARIDDS QPKLLITADA
GMRGGRVIPY KPLVDQACAE SESPPPKVLI VSRGLQPELT WVPGRDEDYA TLRAAVGDAQ
VSVEWLESND PSYLLYTSGT TGKPKGVQRD VGGYAVALAL SMETVFDVAP GQVMFSTSDV
GWAVGHSYNV YGPLIVGATS LLYEGLPTHP DAGIWWSLCE RYAVRTMFSS PTAVRVLKRF
NTDAIARHDL NALRYLFLAG EPLDEPTANW ISRALGKPVI DNYWQTETGW PAITLHPGLE
MKPVKLGSAG LPNLGYRIKV IDELSGAPVA AHQKGMLVVE PPLPPGFMTT IWRDDDRFCS
SYFGHFKEQV YSSLDWAVQD EDGYTYILGR TDDVINVAGH RLGTREIEES AAEASRVAEA
AVIGVPDEIK GQVPVAFVTL RKTASDELQR REAAAEIRQA VESRLGAVAR PARVYIVNLL
PKTRSGKLLR RSLQALALQA DPGDLSTLDD PSALDEIRHA LRRGPDAGN
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