| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pput_2899 |
|---|
| Symbol | |
|---|
| ID | 5194668 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida F1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009512 |
|---|
| Strand | - |
|---|
| Start bp | 3287960 |
|---|
| End bp | 3289168 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 640587347 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_001268213 |
|---|
| Protein GI | 148548111 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.0643206 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.436531 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGCGAAG ACATCAGCAA GATCGTGATT ATCGGTGCCG GTCAGGCCGG GGCGACGGTG
GCCTTCGGCC TGCGCCGCAA CGGATTCGCC GGTGAAATCA CCCTAGTGGG AGAGGAGAGC
CACTTGCCGT ATGAAAGGCC GCAGCTATCC AAGGAAATGC TGCGGCCAGA GGCAAGCGCT
CACAAGTCGA TCAAGACACG GGCTGACTAC GAGGAGCAGA GCATTCTCTT GGAGCTCGGT
TGCAAAGTGG TCCGTGCTGA CGCTCAGGCG CACAGCATCG TCTTGGATGA CGGTCGCCAG
CTTGCCTTTG ACCGGCTGGT GATCGCCACG GGTGTGCAGC CACGCCGACT GTCCTCGGCA
TTTCAGGGTG CACATCGGGT CCACTACCTG CGCACGCTCG AAGATGCAGC GCGCTTGCGC
GCCGACCTTG AAGCAGGGAA GTCACTAGCG ATCGTTGGCG GAGGCGTGAT TGGACTCGAG
GTTGCCGCTG CAGCGCGTGC GCTGAACTGT CCGGTGACCC TGATCGAAGC TGCTGACCGG
CTCATGTCGC GCAGCGTGGA CGAGGTGGTT TCCGCTTATC TGGATCGGGC GCACCGGCGA
AACGGGGTGG ACATTCGCTA CGGCGTGGCG GCCACCGAGT TGCTGGACGA TGGGCGTCTC
AGGCTTTCCG ACGGCGGCAC CGTGCCCGCA GAGGCTGTGC TGGTCGGTAT CGGTGTAACG
CCGAACATCG AGGGCTTTGA ACACCTGGAT ATCACCGATG CCACTGGGGT GCGGGTCGAT
GCGTACAGCC AGACTGTCGT TCCCGGCATC TTTGCCACCG GCGATATCGC CTCACAGCCC
AATGGCGGAG GTTTCGGGCG CATCGAGACC TGGGCCAACG CCCAGGACCA TGCACTGAAT
CTGGTCAAGA ACCTGATGGG CGAAGCGGTG CCCTACGAAG CCCCGGTGTG GTTCTGGTCT
GACCAAGGAC CGATCAACTT GCAGGTCGTT GGGGACGCGG CTAATGGCCG GCGGATTGTC
CGCGGGGATG AGCATGGAGA CGTCTTCAGC GTTTTTCGAC TCGACGCCAA TCAGCAGGTC
ATCGGTTGCG CGACGGTCAA CTCACCAAAA GACATGGCTG TGGCACGTCG TTGGGTGAAG
CAACGCAGTA GCGTCGATCC GCAACGGCTG GCTGACCCAA CCATCCCATT ACGCGACTGT
GCCGTCTGA
|
|---|
| Protein sequence | MGEDISKIVI IGAGQAGATV AFGLRRNGFA GEITLVGEES HLPYERPQLS KEMLRPEASA
HKSIKTRADY EEQSILLELG CKVVRADAQA HSIVLDDGRQ LAFDRLVIAT GVQPRRLSSA
FQGAHRVHYL RTLEDAARLR ADLEAGKSLA IVGGGVIGLE VAAAARALNC PVTLIEAADR
LMSRSVDEVV SAYLDRAHRR NGVDIRYGVA ATELLDDGRL RLSDGGTVPA EAVLVGIGVT
PNIEGFEHLD ITDATGVRVD AYSQTVVPGI FATGDIASQP NGGGFGRIET WANAQDHALN
LVKNLMGEAV PYEAPVWFWS DQGPINLQVV GDAANGRRIV RGDEHGDVFS VFRLDANQQV
IGCATVNSPK DMAVARRWVK QRSSVDPQRL ADPTIPLRDC AV
|
|---|
| |